Methanosarcina sp. MTP4: MSMTP_0878
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Entry
MSMTP_0878 CDS
T03850
Name
(GenBank) Exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
metm
Methanosarcina sp. MTP4
Brite
KEGG Orthology (KO) [BR:
metm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
metm03400
]
MSMTP_0878
DNA repair and recombination proteins [BR:
metm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MSMTP_0878
Archaeal homologous recombinant proteins
MSMTP_0878
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
AKB24347
UniProt:
A0A0E3NUY5
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All DBs
Position
complement(1074155..1076233)
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AA seq
692 aa
AA seq
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MTREIRILHTADTHLGYRQYHSEVRRQDFFNAFSNVVDDALEMQVDAVVHAGDLFDSRNP
TLEDLLDAINIISRLKAAGIPFLSIVGNHESKQNTQWLDLFEEMGIACRLGKKPCMVGDA
AIYGIDSVPKSKIPIFDYSDFEVPENLPEGGKNLLVMHQIMQPFPYGEWSCEEVLENLPF
KVDAVLLGDYHKYEKIKVVDTWVTYPGSTERNSASENEPRSYNIITLSESGLEISRRTIP
TRDFVFISINLKGEEKPYEQIFAAIDEYQETLPESVVFVEISGEPTGVLSFSEIEEYLLN
KGVLVPRARDLRVKEAIPEEALSISFSDPDHAVAEEIKKMSLTDGGLIVDEIVRNPNVVR
SRVDEETENRLVELISAIDFKDPDFKIEMPAPESVPVTGEEPEKEDSGKAEVPEIESEYG
YAENTETLEGSEIAEDPEPVEFPEAFETPESAVVSEEVVSSEPALPLEPALPSDEAVVSE
TNTVPESLEALELVESSEPVEHFQESEVSVESEVPEEPEVPEESEVPEEPEVSEEPEVSE
KVDLPDVPENVQPEKEMNQPEKEEQNEGPVFWKPAASSGVRTDSSETSVKGGHGEEKPFT
AFGSSKNKSPETPARGLDSFIAGEPKAKGGPDSGDKGGLKGKLPEQEPEKKQEQSSEDAG
KSAKPGKEKEKEKGKGKGKPSALRQYNLGDYL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaccagggaaatcaggatactccacaccgcagatacgcacctgggatacaggcagtac
cacagcgaggtccggaggcaggacttttttaatgctttttcaaacgtcgtggacgacgct
ctggagatgcaggttgacgctgtcgtgcatgcgggagacctttttgattccaggaacccg
accctggaagaccttctggatgcgatcaatatcatatcccggttgaaggctgcaggaata
ccttttctgtcaattgtcggaaatcacgagagcaagcaaaatacccagtggctggaccta
ttcgaggagatgggcatcgcatgcaggctcgggaaaaagccctgcatggtcggagatgcc
gcaatctacgggatcgacagtgtcccgaagtcaaagatccctatcttcgactactcggat
ttcgaggtccccgaaaacctccctgagggcgggaaaaacctgcttgtaatgcaccagata
atgcagcctttcccctatggggaatggagctgtgaggaagtgctcgaaaacctgcccttc
aaagtggacgcagttctcctgggagactaccacaagtacgagaaaataaaggtggtggac
acctgggtcacgtacccgggcagcaccgaaaggaacagcgcctccgaaaatgaaccccgt
tcctataatatcatcacgctttccgaatccgggctcgagatctccaggcgcactattcca
acccgggattttgtgtttatttccataaacctgaaaggggaagaaaagccttacgaacag
atttttgcagccattgacgagtaccaggagaccctgccggaatccgtggtcttcgtggaa
atttccggggaaccgacaggggtcctttccttcagtgaaatcgaggagtacctgctaaat
aaaggggttctcgtacccagggcaagggacctgagggtaaaagaagcgatcccggaagaa
gccttaagcatcagtttctcggacccggaccacgcggttgccgaggaaatcaaaaagatg
agccttaccgacggcgggctgattgttgacgaaatcgtccgaaacccgaacgttgtcagg
tcaagggtagacgaagagacagaaaaccggcttgtagaattgatttctgctattgatttc
aaagaccccgatttcaaaatagaaatgcctgccccggagtctgttcccgtgacgggggag
gagcccgaaaaagaggattccggcaaggccgaagttcccgaaattgaaagtgaatacgga
tatgctgaaaataccgagactcttgaaggctctgaaattgccgaagaccccgaacctgtt
gagtttcctgaagcatttgaaacccctgaatcagccgtggtttccgaagaagttgtatcc
tctgaaccagctttgcccttagaaccagctttaccttctgacgaagccgtggtttcggag
acaaatacggtgcctgaatctctagaagcccttgaactggtagaaagctctgaaccggtt
gagcattttcaagaatcagaagtttctgtagagtctgaagttcctgaagagccagaagtt
cctgaagaatccgaagttcctgaagagccagaagtctcagaagagccagaagtttccgaa
aaagttgacttgccggatgtgcctgaaaatgttcagccggaaaaggaaatgaatcagccg
gaaaaggaagagcagaacgaaggccctgtattctggaaacctgcggcttcatccggggta
agaacagattcttccgaaacgtccgtcaaaggcggtcatggggaagaaaaaccgtttacg
gcttttgggtcctccaaaaataaaagccccgaaactccggccagaggtctggatagtttc
attgcgggtgagccgaaagctaaaggtggaccggattccggggataaaggaggtctcaaa
gggaagcttcctgaacaggaaccggaaaagaagcaggaacagtcttcggaagatgccgga
aaatccgcgaagcccggaaaggaaaaagaaaaggaaaagggtaaggggaaaggcaaacct
tcagccctccgtcagtataaccttggtgattacctgtga
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