Methylibium sp. Pch-M: C1M51_12415
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Entry
C1M51_12415 CDS
T05827
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metp03009
]
C1M51_12415
Enzymes [BR:
metp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
C1M51_12415
Ribosome biogenesis [BR:
metp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C1M51_12415
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QAZ40157
UniProt:
A0A4P6GW22
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All DBs
Position
2584401..2585420
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AA seq
339 aa
AA seq
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MATPHPVASPAARPPPAPAVRHLTVGEDGAGQRLDNYLVKTLKGVPKTHVYRIIRSGEVR
VNRGRAAADTRLAAGDELRLPPVRMATPAEREAAPPREFPVVHEDEHLLVIDKPAGVAVH
GGSGVSFGVIEQLRRARPQAKFLELVHRLDRETSGLLLLAKKRSALTRLQDQFRARETGK
TYAALVPGAWPARHKVIDAPLHKYLDGAGERRVRVTGADDEDGQRSITLVQVAATYAGYT
LLDVTIKTGRTHQIRVHLAHAGHAIVGDDKYGDFALNKAFARGEAVPGVKFDRMFLHARR
LRFEHPASGETIELEAALPAECRLLLTALPRAAAPPPPP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtggccaccccgcacccggtcgccagcccggccgcacgaccaccgccggcccccgcggtg
cgacacctgacggtcggcgaagacggcgccggccagcggctcgacaactacctcgtcaag
acgctcaagggcgtgccgaagacgcacgtctaccgcatcatccgcagcggcgaggtgcgg
gtgaaccggggccgcgccgccgccgacacgcggctcgcggccggcgatgaactgcgcctg
ccgccggtgcggatggccaccccggccgagcgtgaggctgcgccgccgcgcgagttcccg
gtcgttcacgaggacgagcacctgctggtgatcgacaagccggccggcgtggccgtgcac
ggcggcagcggcgtgagcttcggcgtcatcgagcagctgcgccgggcccggccgcaggcg
aagttcctggaactggtgcaccggctcgaccgcgagacctcgggcctgctgctgctcgcc
aagaagcgcagcgcactcacgcggttgcaggaccagttccgcgcgcgcgagaccggcaag
acctacgccgcgctggtgcccggggcctggccggcccggcacaaggtgatcgacgcgccg
ctgcacaagtacctcgacggtgccggcgagcgccgggtgcgcgtcaccggcgcggacgac
gaggacggccagcgctcgatcacgctggtgcaggtggccgccacctatgccggctacacc
ctgctcgacgtgaccatcaagaccggccgcacccaccagatccgcgtgcacctcgcgcac
gccggccacgccatcgtcggtgacgacaagtacggcgacttcgcgctgaacaaggccttc
gcccgcggcgaggccgtgccgggggtgaagttcgaccgcatgttcctgcacgcgcggcgg
ctgcgcttcgagcaccccgcgagcggcgagacgatcgagctcgaggccgccctgccggca
gaatgccggctcctgctgactgccctgccgcgcgccgcggccccaccgccccctccatga
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