Methylibium sp. Pch-M: C1M51_17460
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Entry
C1M51_17460 CDS
T05827
Name
(GenBank) pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
metp
Methylibium sp. Pch-M
Brite
KEGG Orthology (KO) [BR:
metp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
metp03009
]
C1M51_17460
Enzymes [BR:
metp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
C1M51_17460
Ribosome biogenesis [BR:
metp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C1M51_17460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
QAZ41065
UniProt:
A0A4P6GZ61
LinkDB
All DBs
Position
complement(3657167..3658417)
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AA seq
416 aa
AA seq
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MATLKLKKPAPGAPSSPAAGRRAPLRSGGVKPARPTLAQAEAERARQRAESTPPPRPERT
DAPPRAGRTAPAAPGRQRSDAPRPSSRRVTDQPPRGPGRPAAERSSRDPNRASERAVSRD
PARGPNSDRRPPRTADSGAPRPLARPPQRPAARAATAAPAAEAHPRLSKRMSELGLASRR
EADEWIERGYVRVDGEVVDQLGARVRPEQQITIDPQAQLEQAQRVTILLHKPLGYVSGQA
EDGHAPAYTLVTAATRWAGDGSKQRFNASQLKHLVPAGRLDLDSTGLLVLTQDGRVAKLL
IGEDSPVEKEYVVRVQWTARPELTDLKQHFPPEALARLRHGLALDGEKLQPAKVSWQNEQ
HLRFVLREGKKRQIRRMCELVGLKVESLKRIRIGRIGLGELPPGQWRYLGPFETFL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcaagctcaagaagccggcgcccggcgcgccctcctctcccgcggccgga
cgccgcgccccgctgcgcagcggcggcgtgaagcccgcgcgcccgacgctggcgcaggcc
gaggccgagcgcgcccgccagcgcgcggaaagcacgcccccaccgcggcccgagcggacc
gacgcaccgcctcgcgccggccgcacggcacccgccgcgcccggccgccagcgcagcgac
gcaccgcgcccctcctcccgcagggtgaccgaccagcccccgcgcggcccgggtcggccc
gctgccgagcgctcgtcgcgtgacccgaaccgcgcctccgagcgagctgtctcgcgcgat
ccggcccgcgggccgaactccgaccgccgccccccgcgcaccgccgacagcggtgcgccg
cgccccttggcccggcctccacagcgcccagcggcccgcgccgccaccgccgcgccggcc
gcagaggcccacccgcgcctgtccaagcgcatgagcgagctgggcctggcctcgcgccgc
gaggccgacgagtggatcgaacggggctacgtgcgcgtcgacggcgaggtggtcgaccag
ctcggcgcccgcgtgcgccccgagcagcagatcaccatcgacccgcaggcccagctggag
caggcgcagcgcgtgaccatcctgctgcacaagccgctgggctatgtgagcggccaggcc
gaggacggccacgcgccggcctacacgctggtcaccgccgccacccgctgggccggcgac
ggcagcaagcagcgcttcaacgccagccagctcaagcacctggtgccggccggccgcctg
gacctcgactccaccggcctgctggtgctgacgcaggacggccgcgtcgccaagctgctg
atcggcgaggacagcccggtcgagaaggaatacgtggtgcgcgtgcagtggaccgcccgg
cccgagctcaccgacctgaagcagcacttcccgcccgaggccctggcgcggctgcgccac
gggctcgcgctcgacggcgagaagctccagcccgccaaggtgtcgtggcagaacgagcag
cacctgcgcttcgtgctgcgcgaaggcaagaagcgccagatccgccgcatgtgcgagctg
gtcggcctgaaggtcgagtcgctcaagcgcatccgcatcggccgcatcggcctgggcgag
ctgccgccggggcagtggcgctacctcgggccgttcgagaccttcctgtga
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