Martelella endophytica: TM49_05075
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Entry
TM49_05075 CDS
T03801
Name
(GenBank) recombinase RecB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
mey
Martelella endophytica
Brite
KEGG Orthology (KO) [BR:
mey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mey03400
]
TM49_05075
Enzymes [BR:
mey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TM49_05075
DNA repair and recombination proteins [BR:
mey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
TM49_05075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJY45206
UniProt:
A0A0D5LM21
LinkDB
All DBs
Position
complement(1106093..1109284)
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AA seq
1063 aa
AA seq
DB search
MAAAELWTIPPGAPFLQTLAAALIDGRLTGHFRHDPKSPLSLADVTIFLPTRRAVRVLRA
EFAALLGGEAAILPEIRALGETDEDESFFEDLLPETAEGLPPIEPVPRLLELAGLILPWR
NRLSDALSALHDGAPLVAPASPADAVWLARDLAELIDAMETERVDWDKLANLEQENYAAW
WQLTAEFLQIAAFYWPGRLDEIGRSSAIAHRNALLSNEAEKLAAYAGAAPVIIAGSTGSV
PAMAELIAAVAGLPQGVIVLPGLDAAMPEEDWQALTLADAVPSMPDPSIRSHPQYEMARL
LQRMALTREDFATLASAAPALEARARIFAAAFAPADATDRWESWREAIAEADFADGFADV
SLMEAANERQEAVAIAAALRLALEEPAEDGRPSRAALITPDRNLARRVAAELHRFSIEAD
DSAGTPLGATPQGTLATLMLEAALKPGDPAVLAALLKHPLARFGLSARKMRAASAAFELI
ALRGGTRPVDYGHLSTFLDNALEAQKDDRHPPHWRNALPRDAAEAARDLVARIDAALSSL
TETHVARGPDQPPLTESHPLSGWAERTGRALEAVAIDDAGDLSALWSGEAGEGLATVLSE
TMASETPIEADGPQWIDIVAALTASEAVKPRQMGNPRVFIFGAVEARLQDADTIVIGGLN
EGVWPTQPKNNPFLSRGMKAEIGLEPPEKRTGQLAHDLTMAAGAPRLILSRALRQGSAPT
VASRWLQRLLAFGGPALAKGLKARGDIMLGWADALDEGPRTAIPGRPEPFPPAESQPERY
SFSEIGRLRRDPYALYAQKVLKLDPLSPFNTDPAIKERGILYHALAERFLKSGADAATEE
GRQAMEEILAGLLLEAELPPHLALSWVPRLRSVAAEFLRFEANRRATTPIETVLTEKAGG
FDMPLAEIRLTGIADRIDILEDGTAEIIDYKTGLSPSLNQARTLLEPQLPLEAAALAAGA
FKDVPALETKSLKYVRLRPGHRFGVDALEKAETKKEAAITAEELASDALREFTRFVTALK
TGKRPFASRLIPASARDFSGEYDHLARVAEWSTADDNGEGGDD
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtggccgctgcagaattgtggacgataccgcccggtgcgccgtttctgcagacgctggcc
gcagcgctgatcgacgggcggctcaccggccatttccggcacgatccgaagagcccgctt
tcgcttgccgatgtgacgatattcctgccgacgcggcgtgcggtgcgcgtgctgcgcgcc
gaattcgcagcccttctgggcggtgaggcggcgatcctgcccgaaatccgggcgctgggc
gaaaccgacgaggacgagagctttttcgaggatctcctgccggaaacggcggaaggcctg
ccgccgatcgagcccgtgccgcgacttcttgagcttgccggcctgatcctgccctggcgc
aaccggctctccgatgccctttccgctctccacgacggcgcgcctctggtcgcgcccgca
agcccggccgatgccgtgtggcttgcccgcgatcttgccgagctgatcgacgcgatggag
acggagcgggtcgactgggacaagctcgcaaaccttgaacaggagaattatgcggcatgg
tggcaactcaccgccgagttcctccagatcgcggccttctactggccgggtcggctcgac
gagatcggccgctcatccgccatcgcccaccgcaatgcgctgctttccaacgaggccgaa
aagctcgccgcctatgccggcgccgcccccgtgatcatcgccggttccaccggctcggtt
ccggcgatggcggaactgatcgcggcggtggccggcttgccgcaaggggtcatcgtactg
ccgggcctcgatgccgcgatgccggaggaagactggcaggcactgacgctggccgatgcc
gtgccctcgatgcccgacccctcgatccgcagccatccgcaatatgaaatggcccgcctg
ctgcagcgcatggcgctgacgcgggaggatttcgcgacgcttgccagcgccgcaccggcg
cttgaggcccgcgcaagaatcttcgccgccgcctttgccccggcggatgccaccgaccgc
tgggaaagctggcgcgaggctatcgccgaagccgactttgccgacggttttgctgacgtc
tcgctgatggaggcggccaatgagcggcaggaggcggtggcaatcgccgcagcgctcagg
ctggcgctcgaagagccggcggaggatggccggccgtcgcgcgccgccctcatcaccccc
gaccgcaaccttgcccgccgggttgccgccgaactccaccgtttttcgatcgaggccgac
gattccgccggtacgccgcttggcgcgacgccgcaggggacgctggcgacgctgatgctg
gaggcagcgctgaagcccggcgatccggccgtgctggcggcactgctgaaacatccgctc
gcccgtttcggcctttccgcccgcaagatgcgcgccgcaagcgccgccttcgagctgatt
gcgctgaggggcggaactaggcctgtcgattacggccacctttcgactttcctcgacaac
gcgctggaagcccagaaggacgatcgccacccgccgcactggcgaaacgccctgccacgc
gatgccgccgaagccgcccgcgatcttgtcgcgcgtatcgatgccgcgctttcaagcctc
accgagacccatgtcgcccgcgggccggaccagccgccgctcaccgaaagccatccgctt
tccggctgggccgagcgcaccggccgggcgctggaggctgttgccatcgacgatgccggc
gacctttccgccctctggtcgggcgaggcgggggaagggctggcgacggtgctttccgaa
accatggcctccgagacgccgatcgaggcagacgggccgcaatggatcgacatcgttgcg
gcgctgacggcttcggaagcggtcaagccccggcagatgggcaatccgcgcgtcttcatc
ttcggcgcggtcgaagcgcggctgcaggatgccgacacgatcgtcattggcgggctgaac
gagggtgtgtggccgacgcagccgaaaaacaatccgttcctgtcgcgcggcatgaaggcg
gagatcgggctggagccgccggagaaacgcaccggccagcttgcccacgacttgaccatg
gcggcaggcgccccgcgcctcatcctgtcgcgggcgctgagacagggatcggcaccaacg
gtcgccagccgctggctgcagcggcttctggccttcggcggcccggcgcttgcaaaaggc
ctcaaggcgcgcggcgatatcatgctcggctgggccgatgcgctggacgaggggccgcgc
accgccattcccggccggccggagccctttccgccagccgaaagccaaccggaacgctat
tccttctccgagatcgggcggctgaggcgcgatccttacgcgctctatgcccagaaggtg
ctgaagctcgatccgctttcccccttcaacaccgatccggcgatcaaggagcgcggcatt
ctctatcacgcgctggccgagcgtttcctgaagtccggcgccgatgcggcaacggaggag
ggacggcaggcgatggaggagatcctcgccggcctgctgctcgaagccgagctgccgccg
catctggcgctgagctgggtgccgcgactgagatcggtggccgccgaattcctgcgtttc
gaggcgaaccggcgggcgaccacgccgatcgaaacggtgctgaccgaaaaggccggcggt
ttcgacatgccgcttgccgagatccggctgaccggcatagccgaccggatcgatattctg
gaagacggcaccgccgaaatcatcgattacaagaccggtctctcgccttcgctcaatcag
gcccgcaccctgctggagccgcaattgccgctggaggcggcagcgcttgccgccggcgcc
ttcaaggacgtcccggcgcttgaaacgaaaagcctcaagtatgtgcggctgaggcccggc
caccgctttggcgtcgatgcgctggaaaaggctgagaccaagaaggaggcggcgatcacg
gcggaagaactggcaagcgacgcgcttcgggaattcacccgcttcgttaccgcgctgaag
accggcaagcggccgtttgcctcgcggctgatcccggcgagcgcgcgcgatttctccggc
gaatatgaccaccttgcccgcgtcgccgaatggtcgacggcggacgataacggggagggc
ggcgatgactga
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