KEGG   Methanocella conradii: Mtc_0954
Entry
Mtc_0954          CDS       T01774                                 
Symbol
recJ-2
Name
(GenBank) Single-stranded DNA-specific exonuclease (RecJ-like)
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mez  Methanocella conradii
Pathway
mez03410  Base excision repair
mez03430  Mismatch repair
mez03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mez00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Mtc_0954 (recJ-2)
   03430 Mismatch repair
    Mtc_0954 (recJ-2)
   03440 Homologous recombination
    Mtc_0954 (recJ-2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mez03400]
    Mtc_0954 (recJ-2)
DNA repair and recombination proteins [BR:mez03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     Mtc_0954 (recJ-2)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Mtc_0954 (recJ-2)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Mtc_0954 (recJ-2)
SSDB
Motif
Pfam: DHH_CID DHHA1 DHH ADH_zinc_N
Other DBs
NCBI-ProteinID: AFC99710
UniProt: H8I4F3
LinkDB
Position
924903..926285
AA seq 460 aa
MQRFQKAAEKCAEKIKKCDEAIVVSHIDADGLTSAGIMCKALERLQKPYEARFAKKLDEA
ALKSIADSCGGRLVIFTDLGSGALATIKSLGIDAVVTDHHRPAPVEYECHMNPHLYGLNG
STEISGAGVAFLLALRLGDNVDLSTLAIVGAVGDLQDMRSNALVGVNRDILELATSRGFI
SYEKDIKLFGRQTRPVYKLLQYSSDPFIPGLSGCEDACIAFIEGAGVPIKTDVWRRWIDL
LPDEKKTITSKLFQYCMSCGMPAHKIQRLVGEVYTLLKEEPGTELRDASEYSTLLNATAR
YDYADVGLAVCMGDRGEAFNYARDLLEAHRHNLVNGLNLVADKGVCRLSNLQYFNAQGEI
RETIVGIIAGMSSSLDCVSRDLPIIGLAKSDGGIKVSARGNHDLILRGLNLAVALSEAAA
AVGGVGGGHDIAAGATIPEGKEDEFLAILDKKIGEQLKGD
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgcagcgattccagaaggcggctgaaaagtgcgcggagaagataaaaaaatgcgatgaa
gcaatcgttgtctcgcacatcgacgcggacggcctcacctccgcgggcataatgtgcaaa
gccctggagaggcttcagaagccctatgaggcaagattcgctaaaaagcttgatgaggcg
gcgctaaagtcgatagcggactcctgcggcggccggctcgtgatattcaccgacctgggg
agcggcgccctcgccacgataaagtcgcttggcatagacgcggtcgtgacagaccaccat
aggccggcgcccgtggaatacgagtgccacatgaacccacacctctatggcctcaacggc
tctacggagataagcggcgccggagtggcgttcctcttggcccttcgcctgggcgataac
gtggacctgagcacgctcgccatcgtcggggcggtaggcgacctccaggacatgcggtcc
aacgccctagtgggagtcaaccgcgacatactggaactggccacatctagaggcttcatc
tcatacgagaaggacatcaagctgttcggcaggcagacgaggcccgtctataagctgttg
cagtatagctctgacccgttcatccccggcctcagcggctgcgaagacgcctgtatcgcc
ttcatcgagggggcgggggtgcccataaagacggacgtctggcgcaggtggattgacctg
ctcccggatgagaaaaaaaccattacgtcaaagcttttccagtattgcatgtcctgcggc
atgcccgcacacaagatacagcggctcgtgggcgaggtgtacactctcttaaaggaggag
ccgggtaccgagctgagggatgcctccgagtattcaacgctgctgaacgccacggcgcgc
tacgactatgcggacgtcgggctggcggtgtgcatgggcgaccgtggggaggctttcaac
tatgccagggaccttttggaggctcatcgccataacctggtgaatggccttaacctggta
gcggataaaggcgtttgtaggctctctaaccttcaatactttaatgctcaaggcgagata
cgggagaccatcgttggaatcatagctggcatgagttctagcctggattgtgttagcagg
gatctgcctataattggcctggctaagtctgatggtggcattaaggtctctgccaggggt
aatcatgatttgattcttaggggtcttaaccttgcggtggccctcagcgaggcggctgcc
gcggtcggtggcgttggcggcggtcatgacatagccgccggtgccaccattcccgagggt
aaggaggatgagtttttggccatccttgataagaagattggcgagcaattgaagggtgat
taa

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