Methanocella conradii: Mtc_0954
Help
Entry
Mtc_0954 CDS
T01774
Symbol
recJ-2
Name
(GenBank) Single-stranded DNA-specific exonuclease (RecJ-like)
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mez
Methanocella conradii
Pathway
mez03410
Base excision repair
mez03430
Mismatch repair
mez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mtc_0954 (recJ-2)
03430 Mismatch repair
Mtc_0954 (recJ-2)
03440 Homologous recombination
Mtc_0954 (recJ-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mez03400
]
Mtc_0954 (recJ-2)
DNA repair and recombination proteins [BR:
mez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Mtc_0954 (recJ-2)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Mtc_0954 (recJ-2)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mtc_0954 (recJ-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AFC99710
UniProt:
H8I4F3
LinkDB
All DBs
Position
924903..926285
Genome browser
AA seq
460 aa
AA seq
DB search
MQRFQKAAEKCAEKIKKCDEAIVVSHIDADGLTSAGIMCKALERLQKPYEARFAKKLDEA
ALKSIADSCGGRLVIFTDLGSGALATIKSLGIDAVVTDHHRPAPVEYECHMNPHLYGLNG
STEISGAGVAFLLALRLGDNVDLSTLAIVGAVGDLQDMRSNALVGVNRDILELATSRGFI
SYEKDIKLFGRQTRPVYKLLQYSSDPFIPGLSGCEDACIAFIEGAGVPIKTDVWRRWIDL
LPDEKKTITSKLFQYCMSCGMPAHKIQRLVGEVYTLLKEEPGTELRDASEYSTLLNATAR
YDYADVGLAVCMGDRGEAFNYARDLLEAHRHNLVNGLNLVADKGVCRLSNLQYFNAQGEI
RETIVGIIAGMSSSLDCVSRDLPIIGLAKSDGGIKVSARGNHDLILRGLNLAVALSEAAA
AVGGVGGGHDIAAGATIPEGKEDEFLAILDKKIGEQLKGD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgattccagaaggcggctgaaaagtgcgcggagaagataaaaaaatgcgatgaa
gcaatcgttgtctcgcacatcgacgcggacggcctcacctccgcgggcataatgtgcaaa
gccctggagaggcttcagaagccctatgaggcaagattcgctaaaaagcttgatgaggcg
gcgctaaagtcgatagcggactcctgcggcggccggctcgtgatattcaccgacctgggg
agcggcgccctcgccacgataaagtcgcttggcatagacgcggtcgtgacagaccaccat
aggccggcgcccgtggaatacgagtgccacatgaacccacacctctatggcctcaacggc
tctacggagataagcggcgccggagtggcgttcctcttggcccttcgcctgggcgataac
gtggacctgagcacgctcgccatcgtcggggcggtaggcgacctccaggacatgcggtcc
aacgccctagtgggagtcaaccgcgacatactggaactggccacatctagaggcttcatc
tcatacgagaaggacatcaagctgttcggcaggcagacgaggcccgtctataagctgttg
cagtatagctctgacccgttcatccccggcctcagcggctgcgaagacgcctgtatcgcc
ttcatcgagggggcgggggtgcccataaagacggacgtctggcgcaggtggattgacctg
ctcccggatgagaaaaaaaccattacgtcaaagcttttccagtattgcatgtcctgcggc
atgcccgcacacaagatacagcggctcgtgggcgaggtgtacactctcttaaaggaggag
ccgggtaccgagctgagggatgcctccgagtattcaacgctgctgaacgccacggcgcgc
tacgactatgcggacgtcgggctggcggtgtgcatgggcgaccgtggggaggctttcaac
tatgccagggaccttttggaggctcatcgccataacctggtgaatggccttaacctggta
gcggataaaggcgtttgtaggctctctaaccttcaatactttaatgctcaaggcgagata
cgggagaccatcgttggaatcatagctggcatgagttctagcctggattgtgttagcagg
gatctgcctataattggcctggctaagtctgatggtggcattaaggtctctgccaggggt
aatcatgatttgattcttaggggtcttaaccttgcggtggccctcagcgaggcggctgcc
gcggtcggtggcgttggcggcggtcatgacatagccgccggtgccaccattcccgagggt
aaggaggatgagtttttggccatccttgataagaagattggcgagcaattgaagggtgat
taa
DBGET
integrated database retrieval system