Mariprofundus ferrinatatus: Ga0123462_0454
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Entry
Ga0123462_0454 CDS
T05213
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mfn
Mariprofundus ferrinatatus
Brite
KEGG Orthology (KO) [BR:
mfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfn03019
]
Ga0123462_0454
03009 Ribosome biogenesis [BR:
mfn03009
]
Ga0123462_0454
Messenger RNA biogenesis [BR:
mfn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Ga0123462_0454
Ribosome biogenesis [BR:
mfn03009
]
Eukaryotic type
Pre-60S particles
RNases
Ga0123462_0454
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ATX81329
UniProt:
A0A2K8L513
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All DBs
Position
complement(461024..461563)
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AA seq
179 aa
AA seq
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MTVNRSNLVWMDLEMSGLDPDRETILEIATIITDGDLNIIAEGPSIVIHQPDEVLDNMDE
WCTQHHAQSGLTANVRNSLISMREAERQTLRFIKKYVPEKTSPLCGNSIHQDRRFLVRYM
QELEAFVHYRNIDVSTIKELARRWYPNIQAPIKQAEHLALADVRESIREMAFYRDKLFR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaatcgaagtaatctggtctggatggatcttgagatgagcggccttgaccct
gatcgcgaaaccattcttgagatcgctaccattattaccgacggtgatctcaatatcatc
gccgagggaccgagtatcgtgattcatcaacccgatgaggtactcgacaacatggatgag
tggtgcacccagcatcatgcccagtccgggttgaccgccaatgtacgcaattccctgata
agcatgcgggaagcggagcggcagacgctcagatttatcaaaaaatatgtgcctgaaaaa
acatcaccgctttgcggcaactccatccatcaggaccggcgctttcttgtccgatacatg
caggagctggaggcatttgttcactaccgtaatattgatgtaagtacgatcaaagagctg
gccaggcgctggtatccgaatatacaggcacccatcaaacaggccgaacatctggcactc
gcagatgttcgagaatcaatcagggaaatggctttctaccgcgacaaattattccgctga
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