Corallococcus macrosporus HW-1: LILAB_13055
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Entry
LILAB_13055 CDS
T01558
Name
(GenBank) ECF subfamily RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mfu
Corallococcus macrosporus HW-1
Brite
KEGG Orthology (KO) [BR:
mfu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfu03021
]
LILAB_13055
Transcription machinery [BR:
mfu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LILAB_13055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_ECF
Sigma70_r2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AEI64518
UniProt:
F8C918
LinkDB
All DBs
Position
complement(3091041..3091733)
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AA seq
230 aa
AA seq
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MLPGNDRSVLEAFRRGETSVLTQVYRTYSPEVLRYLSRKFAVGAEGGTRTVALSALDLDA
AHQETFVRAFRPNMRQAYDGVRPYLGFLLTVARSTAIDLMRASGRVSREAVPMDDAPELT
HLPTEARTPEEEALSAEVRDLVRAFLDTLTDEGRALAQLRFVEGLSQESAALQLQLTRGE
VRVRERRLRTQFTEHLKESGWLDASAEPGRMELGVLLASLALCAIGSMPS
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcctggaaacgaccggtccgtcttggaggctttccgccggggggagacgtccgtc
ctcacgcaggtgtaccggacctattcgcccgaggtgctccgctacctctcgcgaaagttc
gcggtgggcgcggagggggggacgcgcaccgtcgcgttgtccgcgctcgacttggacgcc
gcgcatcaagagaccttcgtccgggccttccggcccaacatgcggcaggcctatgacggg
gttcgcccctacctgggcttcctcctcacggtggcgcgctccacggccatcgacctcatg
cgcgcgtcgggacgcgtgtcccgcgaggccgtccccatggacgacgcgcccgagctgacg
cacctgcccaccgaggccaggacgcccgaggaagaagccctcagcgccgaggtgcgcgac
ctggtccgcgccttcctcgacaccctcacggacgaaggccgcgccctggcgcagctccgc
ttcgtcgaagggctctcgcaggaatccgccgccctgcagctccagctcacccgaggcgaa
gtccgggtgcgcgagcggcggctgcggacgcagttcacggagcatctgaaggaatcgggc
tggctggacgcatcggccgagcccgggcggatggagctgggagtcctcctggcctcgctc
gccctgtgcgcaatcgggagcatgccctcatga
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