Megamonas funiformis: GXM21_12075
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Entry
GXM21_12075 CDS
T06475
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
mfun
Megamonas funiformis
Pathway
mfun02020
Two-component system
mfun02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mfun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GXM21_12075 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GXM21_12075 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfun03021
]
GXM21_12075 (rpoN)
Transcription machinery [BR:
mfun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXM21_12075 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
N_formyltrans_C
HTH_Tnp_ISL3
Fe_dep_repress
LacI
Motif
Other DBs
NCBI-ProteinID:
QIB61087
LinkDB
All DBs
Position
complement(2419249..2420601)
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AA seq
450 aa
AA seq
DB search
MKQSLSLNLKQKLLMTPKLQQSINILQLSAHELGELIEKEYMENPTLEIDSSSEHELEPA
SNFDKTMDFLEYLNKDDEKPEPVANDDDFKVKEFTRNNQTLEEYLSEQVDFTFNDKQEIK
VARYIIGLLDAAGYLRVSTAEISSLLKINEKIIENVLAKIQILEPIGIAARDLPECLAIQ
AKKINVYDGIMKAIIDKYLPKVAEGKIKEIATLENVEPIQVQEAIDIIRTFNPKPGASFG
KENLEYIVPDVVVRDINGQLEVIINETNVPKLRVNSLCYKRDILDTHSKKYIEQHVNSAI
WLIKSIEQRRITLLKVVNEIVKQQEMVFYKGLSYMKPLLMKTVAENIGVHESTVSRTVAN
KYMEMPYGIVALKKFFAGSVSKQNGEEDIIADKVKAKIKELIENENKAKPLSDQQLTNIL
NENGMKISRRTVMKYREQLGFASSSKRKRY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtcattatcgttaaatttaaaacaaaaattgttaatgacaccaaaacttcag
caatccataaatattttacaattatctgcccatgaattaggcgaactcatcgaaaaagaa
tatatggaaaatccgactttagaaatagactcaagctcagaacatgagcttgagcctgct
tctaactttgataaaactatggattttttagaatacttaaacaaagatgatgaaaagcct
gaacctgtagcaaatgacgatgattttaaagtaaaagagttcacgagaaataatcagaca
ttagaagaatatttatcagaacaagtggattttacttttaacgataaacaagagataaaa
gtagctagatatatcattggattattagatgcagcaggatatttaagagtgagtacagct
gaaatatcatcattattgaaaataaatgaaaagataatagaaaatgttttggcaaaaatt
caaatattagaaccaataggaattgcggcgagagatttaccagagtgtttagctatacag
gcaaagaaaattaatgtatatgacggaattatgaaagctattatagataaatatttacca
aaagtagctgagggaaaaataaaagagatagctacattagaaaatgtagaacctatacaa
gtacaagaagcgatagatataattcgcacttttaacccaaaaccaggagcatcttttggt
aaagaaaatttagaatatattgtacctgatgtagtagttagggatattaacggacagtta
gaagtaattataaatgaaacgaatgtacctaaattacgagtaaacagtctttgctataaa
agagatatattagatacgcatagtaaaaaatatattgaacaacatgtaaattctgccatt
tggttgattaaaagtatagaacaaagacgtataactttattgaaagtagtaaatgagatt
gtaaaacaacaagaaatggtattttataaaggcttatcctatatgaagcctttacttatg
aaaactgttgctgaaaatattggtgtacatgaatcaactgttagtagaacagttgctaat
aaatatatggaaatgccttatggtatagtggctttaaagaagttttttgcaggtagtgta
agcaaacaaaacggagaagaagacataatcgctgataaggtaaaagcaaaaataaaagaa
ctcattgaaaatgaaaataaagcaaaaccgcttagtgaccaacaattaacaaatattttg
aatgaaaatggtatgaaaatatcacgaagaacagttatgaaatatagggaacaattgggt
tttgcttcttcatctaaacgcaaaagatattag
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