Mesoplasma florum W37: mflW37_6430
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Entry
mflW37_6430 CDS
T02878
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mfw
Mesoplasma florum W37
Pathway
mfw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mfw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
mflW37_6430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfw03021
]
mflW37_6430
03400 DNA repair and recombination proteins [BR:
mfw03400
]
mflW37_6430
Enzymes [BR:
mfw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
mflW37_6430
Transcription machinery [BR:
mfw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
mflW37_6430
DNA repair and recombination proteins [BR:
mfw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
mflW37_6430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Peptidase_M23
DUF4375
Motif
Other DBs
NCBI-ProteinID:
AGY41710
UniProt:
A0AA86DR69
LinkDB
All DBs
Position
complement(726221..729985)
Genome browser
AA seq
1254 aa
AA seq
DB search
MENKNNKVIKIELASADTIRSWSHGEVTKPETINYKTLKAEKDGLFDEKIFGPTKNYECF
CGKFKKANPMNKGKKCEKCGVELTESIVRRERMGHIELAEPVTHIWMVKVSPSRIASLLD
LKSKELEEVVYFVSHIVLDPGTSKHFAAKEVLDLGVSKSQKTRSKLRPAIEEIVTLINDP
AHRDTLKAERLLEELNNPTIPFSIDEATALISKYTDAKFGIGASAIEELLKQIDLDKEIE
ITKNTLDAIGPNADNSKLLKRLDILESLKRSNQKPEWMVLRVLPVIPPDIRPIIQLDGGR
FTTSEINDLYRRIIIRNERLLKVKEMGAPSIIINNEKRMLQEAVDALLDNERKPRPIQGK
DKRPLKSLTSVLKGKQGRFRQNLLGKRVDYSGRSVIAIGPDLKMYQAGIPREMALTLFKP
FVIQWLQEHEYAENVKVAEKMILQNDPKIWEALEHVIKDRPVLLNRAPTLHRLGIQAFEP
KLVKGKAIRLHPLVTTAFNADFDGDQMAVHVPITKEAVAEARALMLGSNAILGPKDGKAI
VTPGQDIILGNYYATFEEKGQLGEGTMFAEITEAINAFDTGIVSLNAVIGIAVDALPAEK
FTEEQRKGYLLTTVGKILFNQIFDASFPWINSSSIYDAKEAVNSFIFDFSKDINEAIAEY
TIVTPIKKKELSIIIEIYFNKFGARKTAEMLDKMKDLGFKYSTKSGTTISAGDVVAFKHK
YEEFAEADQKVAEITSFYNEGMLTKEEKKHRVIEVWSDVKDDIQKRLELVLKQDTKNPVF
VMADSGARGNVSNFTQLVGMRGLMNDTKGDIKEIPIKSSFREGLSVSEYFVSTHGARKGM
ADLALKTADSGYLTRRLVDVSQEIVVVNEDCKANKGFEIESVIDTKHNNVIVPLKDRIVG
RYSFNDIKDIKGNVIVAKDTLIESKEADAIIAAGITKVTIRSVLTCDNQKGVCQRCYGRN
LATASLVKIGEPVGVIAAQSIGEPGTQLTMRTFHTGGVAGDADITQGLPRIKELLDVTTQ
KGSVAIIAEKAGVVSDIINKNGINTIVVTEEVNGTQIEKQYKTMYNAVLRVNKGDQVKPG
KKLTEGSINLHDLLEVAGTTAVQNYILKEVQKVYRLQGIEISDKYIEIIVKQMLNKVKVI
QSGESHLLQGEIVTQQKFKEVVTQCIREGLVPPVAKNQILGIKKAPLKSESWLSSASFQD
TARVLTDAIIKGREDKLEGLKENIMLGNLIPAGTGLTGIEEVMEIAEEYHKNEY
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaaaacaataaagtaattaaaattgaattagctagtgctgatactattcgt
tcatgatctcatggggaagttactaaacctgaaacaattaactacaaaacattaaaagct
gaaaaagatggtctatttgatgaaaagatatttggaccaactaaaaactatgaatgtttt
tgtggaaaatttaaaaaagctaacccaatgaacaaagggaaaaaatgtgaaaaatgtggt
gttgaattaactgaatcaatcgtgcgtcgtgaaagaatggggcacattgaattagcagaa
cctgttactcatatttgaatggttaaagtatctccatcaagaattgcatcattattagac
ttaaaatctaaagaattagaagaagttgtttacttcgtttcacacatcgttttagatcca
ggaacatcaaaacactttgcagctaaagaagttttagatttaggagtttcaaaatcacaa
aaaactcgtagcaaattaagacctgctattgaagaaattgttacattaattaatgatcca
gctcatagagatacattaaaagctgaaagattattggaagaattaaataatccaactatt
cctttctcaattgatgaagctacagctttaatttcaaaatatactgatgctaaatttggt
attggtgcttctgctattgaagaattattaaaacaaattgatttagacaaagaaattgaa
atcacaaaaaatactttagatgctattggtccaaatgctgataactcaaaattattaaaa
agattagatatcttagaatcattaaaacgttcaaaccaaaaacctgaatgaatggtacta
cgtgtattaccagttattccaccagatattcgtcctattattcaattagatggaggaaga
tttacaacttctgaaattaatgacttataccgtcgtattatcattagaaatgaacgttta
ttaaaagttaaagaaatgggtgcaccatcaattattattaacaacgaaaaacgtatgtta
caagaagctgttgatgcattattagataatgaacgtaagccacgtccaattcaaggaaaa
gacaaacgtccattaaaatcattaacaagtgtacttaaaggtaaacaaggtcgtttccgt
caaaacttacttggaaaacgtgttgactactcaggtcgttcagttattgctattggacca
gacttaaaaatgtatcaagcaggaattcctcgtgaaatggcattaacattattcaaacct
tttgtaattcaatgattacaagaacatgaatatgctgaaaacgttaaagttgctgaaaaa
atgattttacaaaatgatccaaaaatttgagaagctttagagcatgttattaaagataga
ccagttctattaaaccgtgctccaacacttcacagacttggtattcaagcatttgaacct
aagttagttaaagggaaagcaattcgtcttcatccacttgtaactactgcgttcaatgcc
gacttcgatggggaccaaatggcagttcacgttccaattacaaaagaagctgttgctgaa
gctagagctttaatgttaggatcaaatgctattttaggacctaaagatggaaaagcgatt
gttactccaggtcaagatattattttaggaaactactatgctacttttgaagaaaaaggg
caattaggtgaaggaacaatgtttgctgaaattacagaagcgattaatgcttttgataca
ggtattgtttcattaaacgcagttattgggattgcagttgatgcactaccagctgaaaaa
ttcactgaagaacaaagaaaaggatatttattaacaactgttggtaaaattttattcaac
caaatctttgatgcttcattcccatgaattaactcatcaagtatttatgatgcaaaagaa
gcagtaaactcattcatttttgatttctcaaaagatattaatgaagctattgcagaatac
acaatcgtaactccaatcaagaaaaaagaattatcaattattattgaaatttactttaac
aaatttggagcaagaaaaactgctgaaatgttagacaaaatgaaagatttaggatttaaa
tattcaacaaaatctggaacaacaatttcagctggtgacgttgttgcctttaaacataaa
tatgaagaatttgcagaagctgatcaaaaagttgctgaaattacaagtttctataatgaa
ggtatgttaactaaagaagagaaaaaacaccgtgttatcgaagtttgatctgatgttaaa
gatgacattcaaaagagacttgaattggtattaaaacaagatactaaaaacccagttttc
gtgatggctgattctggagcccgtggtaatgtttctaacttcacacaacttgtaggtatg
cgtggacttatgaacgatacaaaaggggatattaaagaaattccaattaaatcatcattc
cgtgaaggtttatcagtttctgaatacttcgtttcaactcacggtgcccgtaaagggatg
gccgatttagccttaaaaactgccgattcaggttacttaacacgtcgtctagttgacgta
tcacaagaaattgttgtagttaatgaagactgtaaagcaaacaaaggatttgaaattgaa
tcagttattgatacaaaacacaacaacgttattgttccgttaaaagacagaatcgttggg
cgttactcattcaatgacattaaagacatcaaaggtaatgttatagttgctaaagatact
ttaattgaatcaaaagaagctgatgcaattattgctgctggaattacaaaagttacaatt
cgttcagtattgacttgtgataaccaaaaaggtgtttgtcaaagatgttatggacgtaac
ttggcaactgcatcattagttaaaattggtgaaccagttggggttattgctgctcaatca
attggtgaaccaggaactcaacttacaatgcgtaccttccataccggaggggttgcaggg
gatgctgatattactcaaggtcttcctcgtattaaagagttacttgacgttacaactcaa
aaaggttcagttgcaattattgctgaaaaagcaggagttgtttcagatattattaacaaa
aatggaatcaacacaattgttgttactgaagaagttaatggtacacaaattgaaaaacaa
tacaaaacaatgtataacgctgtattaagagttaataaaggtgatcaagttaaaccaggt
aaaaagcttactgaaggttcaatcaacttacatgatctattagaagttgctggaactaca
gctgtacaaaactacatcttaaaagaagtacaaaaagtttatcgtttacaagggattgaa
atatcagataaatatattgaaatcatcgtaaaacaaatgttaaacaaagttaaagttatc
caaagtggtgaatctcatttactacaaggtgaaattgtaactcaacaaaaattcaaagaa
gtggttactcaatgtatccgtgaaggtttagtacctccggttgctaaaaaccaaatctta
ggtattaaaaaagctccattgaaatctgaatcttgattatcatctgcttcattccaagat
actgcacgtgtattaacagatgcaattattaaaggaagagaagacaaattagaaggtctg
aaagaaaacattatgttaggaaacttaattcctgcaggaacaggtttaactggaattgaa
gaagtaatggaaattgctgaagaataccacaaaaacgaatattaa
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