KEGG   Marinirhabdus gelatinilytica: G5B37_06260
Entry
G5B37_06260       CDS       T06461                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
mgel  Marinirhabdus gelatinilytica
Pathway
mgel03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mgel00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G5B37_06260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mgel03019]
    G5B37_06260
Enzymes [BR:mgel01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     G5B37_06260
Messenger RNA biogenesis [BR:mgel03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     G5B37_06260
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 P-loop_SecA Fe-ADH UTP25 UvrD-helicase ERCC3_RAD25_C CMS1 Shikimate_DH
Other DBs
NCBI-ProteinID: QIE59175
UniProt: A0A6G6GKR9
LinkDB
Position
complement(1400320..1401588)
AA seq 422 aa
MSFKSLGLSDALLKAISEKGYDTPTPIQQKAIPKILEGRDVLASAQTGTGKTAGFTLPML
QKLTGAQRMHKRPVRALVLTPTRELAAQVLEDVKTYSKHVDIRSTVIFGGVNANPQIRTL
RQGVDILVATPGRLLDLHSQGVFSLKNVEFLVLDEADRMLDMGFARDINKILALLPKRRQ
NLLFSATFSKEIKKLAGSFLNNPVMVEAAPENTTAEKVDQLIYKTNKSSKTALVIKLISE
GDWQQVLIFTRTKHGANRLAQKLDKAKITSAAIHGNKSQGARTKALANFKSGKVRVLVAT
DIAARGLDIPLLPHVINYELPNIPEDYVHRIGRTGRAGASGQAISIVSVDEFEYVQGIEK
LLGERLNQETLEGFEVTENLQDVLDKKAANKAANQRGRQNAGNKNKTKSSSGSRRNSRRN
NR
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcatttaaaagtttagggctgtctgatgccctgctaaaagcaattagcgaaaaagga
tacgatacgccaaccccaattcaacaaaaagccattcctaaaatacttgaaggcagagat
gttttagcctctgcccaaaccggaaccggaaaaacggctggctttacattaccaatgctc
caaaaactaacaggagcccaacgtatgcataaaagacctgtacgtgctttggtactcacc
cctacacgagagttagcagcgcaggttttagaagatgtgaaaacgtactctaaacatgta
gacatacgttctacagtaatttttggtggcgttaatgcaaatccacaaatacgtacttta
agacaaggtgtagacatcttagttgcaaccccagggaggctactcgatttacatagtcaa
ggtgtattttctctcaaaaatgtagagtttttagttttagatgaagcagatagaatgtta
gacatgggttttgctcgtgatattaacaagatactggcactacttccaaaaagacgacaa
aacttattgttttcagctactttttcaaaagaaattaaaaaacttgcaggtagtttttta
aataacccagtaatggttgaagctgctcctgaaaatactacagcagaaaaagtagatcag
ttaatttataaaactaacaagtctagtaaaacggcgttggttataaaattaatttctgaa
ggagattggcagcaagtattaatctttacaagaacgaagcatggtgctaacagactagcg
caaaaactagataaagcaaaaatcacttctgccgccattcatggaaacaaaagtcagggc
gccagaactaaagcattagcaaactttaaaagtggaaaagtaagagtacttgtggcaaca
gatattgcggcgcgcggattagatataccgttactgcctcatgttattaattacgaactt
cctaacattcctgaagactacgtacaccgcattggtcgaactggaagagcgggcgcgagc
ggacaagcaattagcattgtaagcgtagatgaatttgaatatgtgcagggcatagaaaaa
ttactaggtgaacgacttaaccaagaaaccttggaagggtttgaagtcaccgaaaattta
caagatgtactcgataaaaaagctgcaaacaaggcagcaaatcaaagaggtagacaaaat
gctggaaacaaaaacaagacaaaaagtagtagtggcagtagaagaaattctaggcgaaat
aatagataa

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