Mycoplasmoides gallisepticum F: MGF_4565
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Entry
MGF_4565 CDS
T01924
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta' (RNAP subunit beta')
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mgf
Mycoplasmoides gallisepticum F
Pathway
mgf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MGF_4565 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgf03021
]
MGF_4565 (rpoC)
03400 DNA repair and recombination proteins [BR:
mgf03400
]
MGF_4565 (rpoC)
Enzymes [BR:
mgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MGF_4565 (rpoC)
Transcription machinery [BR:
mgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MGF_4565 (rpoC)
DNA repair and recombination proteins [BR:
mgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MGF_4565 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
SHOCT
Acyl-ACP_TE
Motif
Other DBs
NCBI-ProteinID:
ADC31551
LinkDB
All DBs
Position
complement(773575..777435)
Genome browser
AA seq
1286 aa
AA seq
DB search
MDKLKKKNKNKRIRGLQISIASAEEMRSWSHGEVKKPETINYKSLKPETDGLFDEAIFGP
VKDFECACGKYKKIKHRGRTCEKCGVEITESIVRRERMGHIDLAVPVAHIWMTKELPSPS
KISLVLDVSYKEVEEVVYFVNYIILNPGNSKNPVFKFKEVVDLSGKGSKSARIKLRKVLR
EIKDKHQADKHSIVYKRASDYYNKLKESHLPFSIDEVAKFIETHTGIRLGIGAEAILELL
EGVDLQKEYDLINKELNSYSKDLKANKEDQKVKRALRRLETIKWLKESGIKASNMILKVI
PVTPPDTRPIIQLDGARFTTSDINNFYRRIIIRNERLKKIIELRAPSVILNNEKRMLQEV
VDALFDNASRKKPITAKDKRPLKSLTDRLKGKQGLFRQNLLGKRVDYSGRSVIVIGPELK
MYEVGIPAPMILKLFKPFIIRELIMRFNEDGQEIKPIAPNIKIAEQMIAQKSERIWDIVD
KVIKERPVLLNRAPTLHRLGIQAFEPRIVDGKAIRLHPLVTTAFNADFDGDQMAVHVPIS
KEAVAEARAIMLASWHILGPKDGKPVATPTQDMVLGNYYLTTEKRNEKGEGLIFSDFDQV
ILAYEAKQVSIHALIGLSTKCLTKKPFAKQGIVITTVGKAIMNSIMPEEMAYLNDGDNLL
ELDESNIVFAGEDFKQKLAKRPLYKPFGKKTLSKIIEILYKNFPLQKVPQVLDKIKEFGF
KYSTLSSTTISVFDIPRYDNKQEYITKANEMIAKLKHMYQKGLLTDDERYTKVIRLWADV
KDNVSKDIKEIITRPEYKENSIVVIADSGARGNISNFTQLFGMRGLMSKSYNYDQKIKSQ
VIRDTIEVPIKHSFIEGLTINEYFNSSYGARKGMTDIAMKTSKSGYMTRKLVDAAQEVII
NDSDCNTNKGIVVSTITNSLDGGIVETLSERIVTRYTIDPIYDEKTKELLVDADTLITSE
LAEKIAKANVTKALIRSPIYCQSTKGLCQKCFGNDLTTNDLVQIGTAIGVIAAQSIGEPG
TQLTMRTFHTGGTANEGNITQGFERLKQIFDVVSPKEWELATIAENEGVVESITSDATAR
IIRIKTRLEAEEYRVPFDAVISVNPKDVVYPGSKLTEGSIDIKHLLRVAGIETVRQYFLE
EVQKVYRLQGIEIADKYVEVTIRQLTNKLQVIDVGDSDYFVGQTVDINKFRKEVTNMLTA
NKRPPVAINQVFGLDEAPAKTGSFLSAASFQDTKKILTDAAVKNQIDYLVGLKENVILGN
LIPAGTGFMSSEEIIKAGEEALEKEY
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggataagctaaagaaaaaaaataaaaataaacgaattcgtggtttgcaaatctcgatt
gcttcagctgaagagatgagatcttgatctcatggtgaagtaaaaaaacctgaaacgatt
aactataaatcattaaaacctgaaactgatggtttatttgatgaagcaatctttggacct
gtcaaagactttgaatgtgcttgtggtaagtataaaaagatcaaacaccgtggtcgtact
tgtgaaaaatgtggtgttgagattactgaatcgatcgtaagaagagaacgaatgggtcat
attgatcttgctgttccagtagctcacatctgaatgactaaagaattaccttcaccttca
aagatctctttagtattagatgtttcttataaagaagttgaagaggtagtttactttgta
aactacattatcttaaacccagggaattcaaaaaacccggtattcaagtttaaagaagtt
gtcgatctatctggtaagggctctaaatctgccagaattaagttacgtaaagttttacgt
gaaattaaagataaacaccaagctgataaacactcaatcgtttataaacgtgcatcagat
tattacaacaaactaaaagaatcacacctaccgttttcaatcgatgaagttgctaaattc
attgaaacacacacaggaattagattagggattggtgctgaagcgatcttagaactatta
gaaggtgttgatctacaaaaagaatatgacttaattaataaagaattaaattcatattca
aaagatttaaaagctaataaagaagatcaaaaagttaaaagagcactacgtcgtttagaa
acgattaagtgattaaaagaatctggaatcaaagcatctaatatgatcttaaaagtgatt
ccagttaccccacctgacactagaccgatcatccaattagatggggcgcgatttactact
agtgatattaataacttctatcgccgaatcattattcgtaatgaacggttaaagaagatt
attgagctacgtgcaccttctgtgattcttaataatgaaaaaagaatgcttcaagaagtg
gttgatgcattatttgataatgcttcaagaaaaaaaccgattactgcaaaagataaacgt
ccacttaaatcattaactgatcgtttaaaaggtaaacaaggtttattcagacaaaaccta
ttaggtaaacgggtagactattctggtcgttcagtaattgtgattggtcctgaacttaag
atgtatgaagtaggtattcctgctcctatgatcttaaagttgttcaaaccattcattatc
cgcgaactaattatgcgctttaatgaagatggtcaagagatcaaaccgatcgcaccaaac
attaagattgctgaacagatgatcgcccaaaaatctgaacgaatttgggatatcgttgat
aaggtaattaaagaaagaccggtattacttaaccgtgcgccaacattacaccgattaggg
atccaggcttttgaacctaggatcgttgatgggaaagcaatccgcttacacccattggta
acaactgcttttaacgctgactttgacggtgaccagatggctgttcacgtaccaatttct
aaagaagcagttgctgaagctagagcaattatgttagcttcttgacatatcttagggcca
aaagatggtaagccagtagctactccaacccaagatatggtgttaggaaactactactta
accactgaaaaacggaatgaaaaaggtgaagggttaatcttctcagactttgaccaagta
atcttagcttatgaagctaaacaagtatcaattcacgctttaattgggttgtcaaccaaa
tgtttaacaaaaaaaccatttgctaaacaagggatcgtaattacaactgttggtaaggcg
atcatgaactcaattatgcctgaagagatggcttatctaaacgatggtgataatttatta
gaacttgatgaatctaatatcgtttttgctggtgaagatttcaagcaaaaactagctaaa
cgcccactttacaaaccattcggcaagaaaacattatctaagattattgagattctttat
aagaatttcccacttcaaaaagtgccacaagttcttgataagatcaaagaatttggtttc
aaatactcaacactatcatcaacaacaatctcagtctttgatatcccaagatatgataac
aagcaagaatacattactaaagctaatgagatgattgctaaactaaaacacatgtatcaa
aaaggattactaactgatgatgaacgttatacgaaagtaattcgtttatgagctgatgtt
aaagataacgtatctaaagatattaaagagatcattactcgtcctgagtataaagaaaac
tcaatcgtggtgattgctgattctggtgctagaggtaatatctcaaacttcacccagtta
tttgggatgagaggattgatgtctaagtcatataactatgaccaaaagattaaatcgcaa
gtaatccgtgatacgattgaagttccaattaaacactcattcattgaaggattaacgatt
aatgaatacttcaattcttcttatggggcacgtaaggggatgactgatattgcgatgaag
acctcaaaatctggttatatgactagaaagttagttgatgcagcgcaagaagtaatcatt
aatgattctgactgtaacacgaataaggggatcgtggtatcaacgattaccaactcttta
gatggtgggatcgttgaaactttaagtgaaagaatcgttactagatatacgatcgaccca
atttatgatgaaaaaactaaggaactattagttgatgctgacacattaattactagtgag
ttagctgaaaagattgctaaagcaaacgtaactaaagcactaattcgttcaccgatttac
tgtcagtcaactaaagggttatgtcagaagtgttttggtaatgacttaactacaaatgac
cttgttcagattggaactgcgattggagtgattgctgcgcaatcaatcggtgaaccaggg
actcagttaacaatgagaacgttccacactggtggtacggcaaatgaaggtaatattact
caagggtttgaacgactaaaacagatctttgatgtagtctcaccaaaagaatgagaatta
gctacgatcgctgaaaatgaaggggttgttgaatcgatcacttcagatgcaactgctaga
atcattcgcattaaaactagattagaagctgaagaataccgtgttccgtttgatgctgtg
atctcagttaaccctaaagatgttgtgtacccaggttctaaactaactgaaggttcgatc
gacatcaagcacttattacgagttgctgggattgaaacagtaagacagtacttcttagaa
gaagtgcagaaagtttatcgtttacaagggattgaaattgctgataagtacgttgaagta
acgatcagacaattaacaaacaaacttcaagtaattgatgttggtgattctgattatttc
gtggggcaaactgtcgatatcaacaagtttagaaaagaagtgacgaatatgttaaccgcc
aacaaacgcccaccagtagcaattaaccaagtatttggtttagatgaagctccagctaag
actggttcattcctatcagcagcttcattccaagacaccaaaaagatccttactgatgct
gctgtaaaaaatcagattgactacttggttggtctgaaagaaaacgtgatcttaggtaac
ttaattccagctggtactggatttatgagttctgaagagatcattaaagctggtgaagaa
gctttagaaaaagaatattaa
DBGET
integrated database retrieval system
