Mucilaginibacter gossypii: DIU38_029645
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Entry
DIU38_029645 CDS
T06453
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mgos
Mucilaginibacter gossypii
Pathway
mgos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mgos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DIU38_029645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mgos03019
]
DIU38_029645
Enzymes [BR:
mgos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DIU38_029645
Messenger RNA biogenesis [BR:
mgos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DIU38_029645
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Z1
Helicase_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QEM20866
LinkDB
All DBs
Position
complement(6888740..6889915)
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AA seq
391 aa
AA seq
DB search
MGFVNPTPIQSMAIPAIMEGRDLIACAQTGTGKTGAYLLPVLNSISKTNKHHTSALILAP
TRELAQQIDQQVEGLAYFTGISSIAVFGGGDGIVYEQQRRGIQNNVNIIVATPGRLIAHL
TSGVLKLNHLTHLVLDEADRMLDMGFSDDIMKIISYLPKERQTLLFSATMPGRIRSLAKA
ILKDPEQINIAISQPAVGIDQQVYRVHDQQKTPLVQHILKDSAFTSIIIFASRKEIVKAL
YKELKAIKINAMSFHSDLEQKEREEILLKFKNKQLPVIIGTDALSRGIDVEGIDLVINYD
VPGDPEDYIHRIGRTARAATTGTAITFVNHRDERKLKNIEKLIEKPIKLMALPDELATIQ
PLKPEQPHGDAKRKPNRRWGKKKPKQQNTGN
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcgtaaaccccacacccatacaatctatggccatcccagccattatggagggg
cgcgacctgattgcatgcgctcaaaccggtaccggtaaaaccggcgcttatttgcttcct
gttttaaacagcatcagcaaaacaaataaacaccataccagtgcccttatacttgcccca
acccgcgagcttgcccagcaaatagatcagcaggttgaaggccttgcctattttaccggt
atcagctctattgctgtttttggcggcggcgacggcattgtttacgaacaacagcgccgc
ggcattcaaaacaatgtaaatattattgtagctacccccggcagactgatagcccacctt
acatcgggcgtgctgaagcttaatcaccttacccatttggtacttgatgaggccgaccgg
atgctggatatgggcttttctgatgatatcatgaaaattatcagctacctgccaaaagag
aggcaaactctgttgttttcggccaccatgccaggccgtatccgttcattggccaaagct
attttgaaagatccggagcagatcaatatcgctatttcgcagccggccgttggtatcgat
cagcaggtttaccgggttcatgatcaacaaaaaacgccgttggtacagcatatcctgaaa
gattcggcatttacaagcatcatcatctttgcatcgcgcaaggaaattgttaaagcgcta
tacaaagaacttaaggcgattaagatcaacgccatgtcgttccattccgatctggaacag
aaggagcgtgaagagatcctccttaaattcaaaaacaagcaattaccagttatcatcggt
accgacgccctttcgcgcggcattgatgtggagggcatcgacctggtgatcaactacgat
gttcccggcgatccggaagattatattcaccgtattggtcgtacggcccgcgccgctacc
accggtaccgccataaccttcgttaaccaccgcgacgagcgcaagcttaaaaatattgag
aaactgattgaaaagccgataaagctgatggcactgccggatgaactggccacaatacaa
cccctgaagcccgaacagcctcacggagatgccaaaaggaaacctaaccgtcgctggggc
aaaaagaagccgaaacagcagaatacgggtaattaa
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