Magnetospirillum gryphiswaldense MSR-1: MSR1_31800
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Entry
MSR1_31800 CDS
T05662
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry03030
DNA replication
mgry03430
Mismatch repair
mgry03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MSR1_31800
03430 Mismatch repair
MSR1_31800
03440 Homologous recombination
MSR1_31800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mgry03032
]
MSR1_31800
03400 DNA repair and recombination proteins [BR:
mgry03400
]
MSR1_31800
Enzymes [BR:
mgry01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MSR1_31800
DNA replication proteins [BR:
mgry03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MSR1_31800
DNA repair and recombination proteins [BR:
mgry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MSR1_31800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AVM75646
LinkDB
All DBs
Position
complement(3361439..3362464)
Genome browser
AA seq
341 aa
AA seq
DB search
MKLSGQKAEAFIRAPDPAMRAILVFGPDNGLVRERAVKLAKTVLPDLNDPFRVAELTAAA
LKDDPARLADEAAAMALTGGRRVVMVRDAGDTLSSLFQSFLDNPTGDAMVVVEAGELGPR
SSLRKLFEGAANAVALASYADEGASLQQVIAEELKVSGLSAEADAMSFLMDHLGGDRRLT
RSELQKLALYMGGPGRISLEDAIACIGDTAALSMDDLSLATADGDHGTAQRVLDRLTREG
TSPVAVLRALSRHFQRLHLAAGTMAMGKSADQAMNALKPPVIFKAADRFRRQLSRWSAER
AGQALERLIEAEMDCKSTGMPATEICSRVIMTLCRAAGRSK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctgtcgggccagaaggccgaggctttcatccgtgcccccgacccggccatgcgg
gccatcctggtattcggccccgataacggtctggtgcgcgaacgtgcggtcaaattggcc
aagacggtcctgcccgatctcaacgatcccttccgcgtcgccgagctgaccgccgccgcc
ctcaaggacgacccggcccgcttggccgacgaggcagccgccatggccctgaccggcggg
cggcgggtggtgatggtgcgtgacgccggcgacaccttgtcatccttgttccaaagcttc
ctcgacaaccccacgggcgatgccatggtcgtggtcgaggccggcgaattgggaccgcgc
tccagtttgcgcaaactgttcgagggtgcggccaatgccgtggccctggccagttacgcc
gacgagggcgccagcctgcaacaggtcattgccgaagaactgaaggtgagcggcctgagc
gccgaagccgatgccatgtcgtttctgatggaccatttgggcggcgaccgccggctgacc
cgatcagaattgcagaaactggcgctgtacatgggtggaccgggccgcatcagcctggaa
gacgccatcgcctgtatcggcgacaccgcggcgctgtccatggacgatttgtcgctggct
accgccgatggcgaccacggcaccgctcagcgggttctggaccgcctcacccgcgagggc
accagcccggtggcagtgctgcgggcgttatcacgccatttccaacgcctgcatctggcc
gccggcaccatggccatgggtaaatccgccgatcaggccatgaacgcgctgaagccgccg
gtgatcttcaaggccgccgaccgcttccgtcgccaattatcacgctggtcggccgaacgg
gcgggacaggcgctggaacggctgatcgaagcggaaatggactgcaaaagcaccggcatg
ccggcgaccgaaatctgttcccgcgtcatcatgaccctgtgtcgggcggcgggccgcagc
aaataa
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