KEGG   Magnetospirillum gryphiswaldense MSR-1: MSR1_38140
Entry
MSR1_38140        CDS       T05662                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
mgry  Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00470  D-Amino acid metabolism
mgry00550  Peptidoglycan biosynthesis
mgry01100  Metabolic pathways
mgry01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:mgry00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    MSR1_38140 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MSR1_38140 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    MSR1_38140 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:mgry01011]
    MSR1_38140 (ddl)
Enzymes [BR:mgry01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     MSR1_38140 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:mgry01011]
 Precursor biosynthesis
  Amino acid ligase
   MSR1_38140 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 B12-binding ATP-grasp_4 GARS_A Peripla_BP_6 NAD_binding_8 ATP-grasp RimK
Other DBs
NCBI-ProteinID: AVM76271
LinkDB
Position
complement(3988527..3989447)
AA seq 306 aa
MSRRVTVLMGGASAERDVSLRSGAAAAAALEQAGFTVATIDAGRDVAALAQAITASRPDV
VFNALHGRFGEDGCVQGLLNLLGIPYTHSGLLASAAAMDKAFSRQVFQQAGIPVAHGVVV
KKTDGGADPMKRPFVVKPINEGSSVGVYVMKPGDNRAPLADWPFESDRVLVEEFVPGREL
TVAVMGDRALGCLEITSERGFYDYDAKYAPGGSKHIMPAPIPAEDYAEACRLAVEAHRVL
GCRGVSRADLRYDDTKPGQKPRLIVLEVNTQPGMTATSLVPDIASYCGISFPELVRWMVE
QAECDG
NT seq 921 nt   +upstreamnt  +downstreamnt
atgagccgccgcgtcaccgtgctgatgggcggagcctccgccgaacgcgacgtgtcgttg
cgctcgggcgccgccgccgccgccgctctggaacaagccggcttcaccgttgccaccatc
gatgccgggcgcgatgtggcggccttggcccaggccatcaccgccagccgtcccgacgtg
gtgttcaacgcgctgcatggccgtttcggcgaggatggctgcgtccagggtctgctcaat
ctgctgggcatcccctatacccattccggcctgttggcctcggccgccgccatggacaag
gcattttcccgccaagtgttccagcaggccggcatcccggtggcccatggcgtggtggtg
aaaaagaccgatggcggcgccgaccccatgaagcgtccgttcgtggtcaagcccatcaac
gagggctcgtccgtcggcgtctatgtgatgaagccgggcgacaaccgcgcccccctggcc
gattggccgttcgagtccgaccgcgtgctggtggaagaattcgtccccgggcgcgagctg
accgtggcggtgatgggcgaccgcgccctgggctgtctggaaatcacctcggaacgcggc
ttctacgattatgacgccaaatatgcgccgggcggctcgaagcacatcatgcccgccccc
atcccggcggaagattacgccgaggcctgccggctggcggtggaagcccatcgcgtgctg
ggctgccgcggcgtgtcgcgcgccgatctgcgttacgacgacaccaagcccgggcaaaag
ccgcgtctgatcgtgttggaagtcaacacccagccggggatgaccgccacctcgctggtc
cccgacatcgcgtcttattgcggcatcagcttccccgagttggtgcgctggatggtcgag
caagcggagtgtgacggatga

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