Magnetospirillum gryphiswaldense MSR-1: MSR1_38140
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Entry
MSR1_38140 CDS
T05662
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
mgry
Magnetospirillum gryphiswaldense MSR-1
Pathway
mgry00470
D-Amino acid metabolism
mgry00550
Peptidoglycan biosynthesis
mgry01100
Metabolic pathways
mgry01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
mgry00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MSR1_38140 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
MSR1_38140 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
MSR1_38140 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
MSR1_38140 (ddl)
Enzymes [BR:
mgry01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
MSR1_38140 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
mgry01011
]
Precursor biosynthesis
Amino acid ligase
MSR1_38140 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
B12-binding
ATP-grasp_4
GARS_A
Peripla_BP_6
NAD_binding_8
ATP-grasp
RimK
Motif
Other DBs
NCBI-ProteinID:
AVM76271
LinkDB
All DBs
Position
complement(3988527..3989447)
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AA seq
306 aa
AA seq
DB search
MSRRVTVLMGGASAERDVSLRSGAAAAAALEQAGFTVATIDAGRDVAALAQAITASRPDV
VFNALHGRFGEDGCVQGLLNLLGIPYTHSGLLASAAAMDKAFSRQVFQQAGIPVAHGVVV
KKTDGGADPMKRPFVVKPINEGSSVGVYVMKPGDNRAPLADWPFESDRVLVEEFVPGREL
TVAVMGDRALGCLEITSERGFYDYDAKYAPGGSKHIMPAPIPAEDYAEACRLAVEAHRVL
GCRGVSRADLRYDDTKPGQKPRLIVLEVNTQPGMTATSLVPDIASYCGISFPELVRWMVE
QAECDG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagccgccgcgtcaccgtgctgatgggcggagcctccgccgaacgcgacgtgtcgttg
cgctcgggcgccgccgccgccgccgctctggaacaagccggcttcaccgttgccaccatc
gatgccgggcgcgatgtggcggccttggcccaggccatcaccgccagccgtcccgacgtg
gtgttcaacgcgctgcatggccgtttcggcgaggatggctgcgtccagggtctgctcaat
ctgctgggcatcccctatacccattccggcctgttggcctcggccgccgccatggacaag
gcattttcccgccaagtgttccagcaggccggcatcccggtggcccatggcgtggtggtg
aaaaagaccgatggcggcgccgaccccatgaagcgtccgttcgtggtcaagcccatcaac
gagggctcgtccgtcggcgtctatgtgatgaagccgggcgacaaccgcgcccccctggcc
gattggccgttcgagtccgaccgcgtgctggtggaagaattcgtccccgggcgcgagctg
accgtggcggtgatgggcgaccgcgccctgggctgtctggaaatcacctcggaacgcggc
ttctacgattatgacgccaaatatgcgccgggcggctcgaagcacatcatgcccgccccc
atcccggcggaagattacgccgaggcctgccggctggcggtggaagcccatcgcgtgctg
ggctgccgcggcgtgtcgcgcgccgatctgcgttacgacgacaccaagcccgggcaaaag
ccgcgtctgatcgtgttggaagtcaacacccagccggggatgaccgccacctcgctggtc
cccgacatcgcgtcttattgcggcatcagcttccccgagttggtgcgctggatggtcgag
caagcggagtgtgacggatga
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