Mycoplasmoides gallisepticum NY01_2001.047-5-1P: HFMG01NYA_2955
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Entry
HFMG01NYA_2955 CDS
T02202
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD (Sigma-A)
KO
K03086
RNA polymerase primary sigma factor
Organism
mgt
Mycoplasmoides gallisepticum NY01_2001.047-5-1P
Brite
KEGG Orthology (KO) [BR:
mgt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HFMG01NYA_2955 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgt03021
]
HFMG01NYA_2955 (rpoD)
Transcription machinery [BR:
mgt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HFMG01NYA_2955 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
DUF722
Motif
Other DBs
NCBI-ProteinID:
AFP78263
LinkDB
All DBs
Position
complement(496388..498319)
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AA seq
643 aa
AA seq
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MLFIPLTFTRMAKNTNSTPKNKTASKAKNISQLSLKQRLELAKKQEKTPAKKLVNKKTET
VSKTKKTAKPTKVEKPVSEKKLSVATKAKSEKVVVEQPKAKTTVKKVKAAPTKKEVVLKD
KKAKAEPKSVAKEEKKNKLSLKSANKSTKKKVTSKKDENLDLNNEIDFADFDNKDDEIDF
SDFKHENYSSAFKETDFSEQDELDDKEFNLSDFFSDSKLDIDQPITAQKRQRGRKPKHAP
SNEKNDLVYHEVLEASSKTKNNDQESIRATKTLLAKAKATKSLSNEEIIDVFKNYEFTEA
EDLEILEELKDNKIKLEDNVEEKISLFRKNQDLSEIDKNLDDLISKGASTKDKVEDNVKA
FLGTLGSSKILNFGEEIQIAKLLGSTDPETREYAINQLVTSNLRLVTSIAKKYLNRGLDF
VDLIQEGSIGLMKAISKFNYKLGNKFSTYATWWIRQAITRAIADQARTVRIPVHMVETIN
KLIKTERMLTQQLGRDPTLEELTEAMGGQVNGFTPKKVADIKKLNQEPVSLDKPIGHDEE
SQFVDFVKDRDILKPDEYTEKLIVTEHINELFVNTLTKKEEQIIRMRYGLHPWHQQMTLE
EVGQKFNVTRERIRQIESKALRKLKHPSKNARLRSFLKHDSEN
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
ttgctttttatacctttaacatttacaagaatggcaaaaaatacaaattcaactcccaag
aacaaaactgcttctaaagctaaaaatattagccaattgtctttgaaacaaagacttgaa
ttagctaaaaaacaagaaaaaacaccagctaagaagttagtgaataaaaaaacagaaaca
gtaagtaagactaagaaaactgcaaagcctactaaagtagaaaaacctgttagtgagaaa
aaactaagtgtagcaactaaagctaaatcagaaaaagtagtggttgaacaacctaaagct
aaaaccacagttaaaaaagttaaagctgcacctactaaaaaagaagttgtccttaaagat
aagaaagcaaaagctgaacctaaatcagtagctaaagaagaaaagaaaaataagctttca
ttaaaatcagcaaataaatcaactaagaaaaaagtaactagtaagaaagatgaaaatctt
gatttaaataacgaaatagattttgctgattttgataataaagatgatgagatcgatttt
agtgatttcaaacatgaaaattattcatcagcttttaaagaaactgattttagtgaacaa
gatgaattagacgataaagaatttaatttatctgattttttcagtgatagcaaactagat
attgaccaaccaattacagcgcaaaagcgtcaaagaggtcgtaagcctaagcatgctccc
agcaatgaaaaaaacgatttagtttatcatgaagtattagaagcttcatctaaaacaaag
aataacgatcaagaatcaattcgagctactaaaacccttttagctaaggctaaagcaact
aaatctttatcaaatgaagagattattgatgttttcaaaaactatgaattcactgaagct
gaagatttagaaattcttgaagaattaaaagacaataagattaaattagaagataatgtt
gaagaaaagatctcattatttagaaaaaatcaagatttaagtgaaattgataagaactta
gatgatcttattagtaaaggtgcttcaactaaagataaagttgaagataatgttaaagcg
tttttaggaacattaggttcatctaagatccttaattttggtgaagagattcagattgct
aaactactaggaagtactgatcctgaaactagagaatatgcgatcaaccaattagtaaca
tctaacttaagattagttacttcgatcgcaaagaaatatctaaacagaggtttagatttc
gttgatctgatccaagaaggttcgatcggattgatgaaagcaatctctaagtttaattac
aaactgggaaacaagttctcaacttatgcaacatgatggatcagacaagcgatcacaaga
gcgattgctgatcaagcaagaacagtaagaattcctgttcatatggttgaaacgatcaat
aagttaattaaaactgaaagaatgttgactcaacaacttggaagagacccaacattagaa
gaattaactgaagcaatgggtggtcaagttaacggatttacccctaaaaaagttgctgat
attaaaaagttaaaccaagaaccagtttcattagataaaccgattggtcacgatgaagaa
tcacaattcgttgattttgttaaggatcgtgatatcttaaaaccggacgaatacactgaa
aaactaattgttactgaacatatcaatgaactttttgttaacacgttaacaaaaaaagaa
gaacagattatcagaatgcgctatgggttacacccttgacaccaacaaatgacccttgaa
gaagttggtcaaaagtttaatgtaacaagagaaagaattcgtcagattgaatctaaagct
ttaagaaaattaaaacacccttctaaaaatgcgagattacgttctttcttaaaacatgac
tcagaaaattaa
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