Mycoplasmoides gallisepticum VA94_7994-1-7P: HFMG94VAA_1803
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Entry
HFMG94VAA_1803 CDS
T02203
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta (RNAP subunit beta)
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mgv
Mycoplasmoides gallisepticum VA94_7994-1-7P
Pathway
mgv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mgv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HFMG94VAA_1803 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mgv03021
]
HFMG94VAA_1803 (rpoB)
03400 DNA repair and recombination proteins [BR:
mgv03400
]
HFMG94VAA_1803 (rpoB)
Enzymes [BR:
mgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HFMG94VAA_1803 (rpoB)
Transcription machinery [BR:
mgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HFMG94VAA_1803 (rpoB)
DNA repair and recombination proteins [BR:
mgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HFMG94VAA_1803 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AFP75832
LinkDB
All DBs
Position
300169..304341
Genome browser
AA seq
1390 aa
AA seq
DB search
MKKNSAFHNTQYSPKVVRRDYSKVHNKYNPLNLPGIQVNAYKQFLEKELEEIIGSYFPIK
SPNGKYSVEFHGMKILDPQITKEEASAESKTYDASLYVNLSLVNHQTGTVKKISKKSAKS
KAEGIYFADIPLMTENGAFIVNGIEKFVVAQIVRSPGAYILNKSQVKLSNSRKRNQEGYI
CEVFPSKGTLMLFYIAENKDFVQAVVRDVGGESAKVFSITTLLKAFGLSEIKIKEIFNNN
DYILRSLESEFYNEKQILNEADIAQLIRDIESDRISKVKSLPIDQKWKNLVLDWYKLNQE
KQELLNSSNPNPTKIESLNTHIGVVLRKLICEKAAKHVIQELSISTRSLDNVSQKEEISY
QSILLQHFFQKKRYDLSSAGRHKFVRKLRVSERLYQRTIAQDIKDLDGNVVIKQGTLMLK
EQLDLFKRLSKEKRLDIIKQIDFINPELNTQFTDVNTYEEVQIYVNNDLRNETTQIIGID
GSNESIETLTLADLISIVSYIVNLPFNIGLYDDIDHLGNKRLKLINELLKSKVQTGMMRI
EKYIKDKLQTADGNNKLADQDAENDPDSDLGTKSSNDLTVKSVINPKPFQIVIKDFFNTH
QLTQFLDQQNPLSELTNKRRISAMGPGGISREDPNLDIRDVHYSHYGRICPIETPEGMNI
GLIMSLAFYATIDKNGFLMTPYLKVENGKITDKVEHLTALREDEYIIAEASSYMDVAKDG
TINNEKIIARYRSSQDLYDPKQVDYIDVSPKQVVSVAASLIPFLENDDSSRALMGANMQR
QATPLLKPYSPLVGTGVEYKIAQDSGMLVTAKNPGTVTYVDASKITVKGEDNKSTDYNLL
KFVKSNKNTCYNQSPIVAVGDKIETNQALADGPSMKNGELALGQNVLVGFTTWSGYNYED
AVIISDRLFKDDVYSSIHIDEYTIECLRTKNGDEEITRDIPNISESAKRYLDEEGVIMVG
AEVKEGDILVGKTSPKGQVELTPEEKLIQAILGDKVKQVRESSLKVPNGGDGIVAGIKRF
SIANGDELEDDVLELVKVYVVQKRKIQIGDKVAGRHGNKGIISKIVAQEDMPHLEDGTPL
DILLNPLGVPSRMNIGQIFELHLGYAARELAKAKLIEACFDKKLADQLDTVFGLEKSKTQ
SLIKNLVEHMKSIGVTSLAQTKNRVRTIDIDIVLKQLGLTYDDLAFKIATPVFEGVNMED
LKAIMSEAGIDPDKTEGKFKLIDGRTGEPFEKPISVGIMYMLKLDHMVDDKIHARAVGPY
SKITQQPLGGKSQNGGQRFGEMEVWALQAYGAAHNLREILTIKSDDVRGRNMTYNAIVKG
LSIPEPGVPESFKLLTKELQGLGMTLNVLYDDDSIENINNISVVDESLEPKIHDAEFDTF
TLDDYNDDNF
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaaactcggcctttcataatactcaatattcaccaaaagtagttagaagagac
tattcaaaagttcataacaaatataaccccttaaatttaccagggattcaagtaaacgct
tataagcagtttcttgaaaaagaattagaagagatcatcggatcatacttcccaatcaaa
tcaccaaacggaaaatattctgtggaattccacgggatgaagatccttgatccacagatc
acaaaagaagaagctagtgcggaatcaaaaacctatgacgctagtctatatgttaattta
tctttagttaaccaccaaactgggacagtaaaaaagatcagtaaaaaatcagctaaatca
aaggctgaagggatctattttgctgatattccattgatgactgaaaacggagctttcatt
gttaatgggattgaaaagtttgttgttgctcagatcgtgagatcaccaggtgcttacatt
ctaaataagtcacaagttaaactatctaactcaagaaaacgtaaccaagaaggttatatc
tgtgaagtattcccttctaagggaacattaatgttgttctatattgctgaaaacaaagac
tttgttcaagcagttgtgcgtgatgttggtggtgaaagtgctaaggtattttcaattaca
acactacttaaagcctttggtttaagtgagattaagattaaggagatctttaataataat
gattacatcttaagatcattagaatctgagttttataatgaaaaacaaattcttaatgaa
gctgatatcgcgcaattaatccgcgatatcgaatcagatcggattagtaaagttaaatct
ttaccaatcgatcaaaaatgaaagaatttagttttagattgatacaaactgaaccaagaa
aagcaagaactactaaactcatctaacccaaatccaactaagatcgagtctttaaacacc
cacatcggtgttgttttaagaaaactaatctgtgaaaaggctgctaaacacgtaattcaa
gaactatcaatctcaacaagaagtcttgataacgtttcacaaaaagaagagatctcttac
caatcaatcttattacaacacttcttccaaaagaaacgttatgacctatcttcagcaggt
cgtcacaaattcgttcgtaaactaagagtttctgaacgtttataccaacgaacaattgct
caagatattaaagatcttgatggtaatgttgtaattaagcaagggacgttaatgcttaaa
gaacaacttgatttatttaaacgtttatcaaaagaaaaacgtttagatatcatcaagcag
atcgatttcattaacccagaacttaatacgcaatttactgatgtaaatacgtatgaagaa
gttcagatttatgttaataatgatctaagaaatgaaacaacccaaattattgggatcgat
ggatctaatgaatcgattgaaactttaactttagctgatctaatttcgatcgtttcatat
attgttaacttaccattcaatatcggtttatatgacgatattgatcatttaggcaataag
cgtttaaaactaattaacgaactattaaaatctaaagttcaaaccggaatgatgcggatt
gaaaaatacatcaaagataagttacaaactgcagatggtaataataagttagctgatcaa
gatgctgaaaacgatcctgattcagatcttggtactaagagtagtaatgatctaactgtg
aaatcagttattaatccaaaaccattccaaatcgtgattaaagatttctttaacacgcac
caattaacccaattcttagaccaacaaaacccattatctgaattaactaataagagaaga
atttcagcaatgggtcctggggggatctcacgggaagaccctaacttagatattcgtgac
gttcactactctcactatggaagaatctgtccgattgaaacccctgaagggatgaacatc
ggtttgattatgtcattagcgttttatgcgaccattgataagaacggtttcttaatgacc
ccttatctaaaagtagaaaacggtaagattacagataaagttgaacacttaactgcacta
agagaagatgaatatattattgcagaagcttcttcttatatggatgttgctaaagatgga
acgattaataacgaaaagattattgctagatatcgttcatctcaagatctatatgaccct
aagcaagtggattatatcgacgtttcaccaaaacaagttgtttcagtagcagcttcatta
attccgtttttagaaaacgatgactcttctcgggctttgatgggtgcaaacatgcaacgt
caagctacacctttactaaaaccttactctccattagttgggactggtgttgagtataag
atcgctcaagactcagggatgttagtaactgctaaaaatcctggaacagttacttatgtt
gatgcaagtaagatcactgttaagggtgaagataataaatcaactgattacaacttatta
aagtttgttaaatcaaataagaacacttgttataaccaatcaccgatcgttgctgttggt
gataagattgaaactaaccaagctttagctgatggtccatcaatgaaaaacggtgagctc
gcactaggacaaaacgttctagttggttttactacttgaagtggttataactacgaagac
gcagtgattatctctgaccgtttatttaaggatgatgtttattcatcaattcatatcgat
gaatacacgatcgaatgtttaagaactaaaaacggtgatgaagaaattactagagatatt
ccaaatatctcagaatcagctaagcgctaccttgatgaagaaggtgtgattatggttggg
gctgaagttaaagaaggtgatatcttagtaggaaaaacttcaccaaaaggtcaagttgaa
ctaacccctgaagaaaaactgatccaagcaatcttaggtgataaggtaaaacaagttcgt
gaatcatcactaaaagtaccaaacggtggtgatgggatcgttgctggaatcaagcgtttt
agtattgctaatggtgatgaattagaagatgacgttttagaactagttaaggtttacgta
gttcaaaaacgaaagattcagatcggtgataaggttgctggtagacacggtaacaagggg
attatttctaagatcgttgcccaagaagatatgcctcaccttgaagatggaaccccactt
gatatcttattaaacccattaggggtgcctagccggatgaatattggtcagatctttgaa
ttacatttaggttatgcagctagagagttagctaaagctaaattaattgaagcttgtttt
gataagaaactagctgatcaattagacacagtatttggtttagaaaaatcaaaaactcaa
agtttaattaaaaacctagttgagcatatgaaatcaattggggtaactagtcttgcacaa
actaagaaccgcgttcgtacgatcgatattgatatcgtactaaaacaattaggtttaact
tatgatgatttagcatttaagattgccacaccagtatttgaaggtgtgaatatggaagat
ctaaaagcaatcatgtcagaagctgggatcgaccctgataagactgaaggtaagtttaaa
ctgatcgatggtcgaactggtgaaccgtttgaaaaaccaatctcagttggtatcatgtac
atgttaaaacttgaccacatggttgatgataagattcacgccagagcagttggtccttat
tctaagattacccaacaaccactaggtggtaagtcacaaaacggtggtcaaagatttggg
gagatggaagtgtgagcacttcaagcttatggtgctgcgcataacttaagagagatctta
acgattaaatcagatgacgttaggggaagaaatatgacctacaacgcgatcgttaaaggg
ttaagtattccagaacctggtgtacctgaatcatttaagttattaactaaagaacttcaa
ggtttaggaatgacgcttaatgtgttgtatgatgatgattcaatcgaaaatattaataat
atctctgtagtcgacgaaagtctagaaccaaaaatccacgatgccgagtttgacacattt
actttggatgactacaacgacgataacttctaa
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integrated database retrieval system