KEGG   Mycoplasmoides gallisepticum VA94_7994-1-7P: HFMG94VAA_1803
Entry
HFMG94VAA_1803    CDS       T02203                                 
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta (RNAP subunit beta)
  KO
K03043  DNA-directed RNA polymerase subunit beta [EC:2.7.7.6]
Organism
mgv  Mycoplasmoides gallisepticum VA94_7994-1-7P
Pathway
mgv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mgv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HFMG94VAA_1803 (rpoB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mgv03021]
    HFMG94VAA_1803 (rpoB)
   03400 DNA repair and recombination proteins [BR:mgv03400]
    HFMG94VAA_1803 (rpoB)
Enzymes [BR:mgv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HFMG94VAA_1803 (rpoB)
Transcription machinery [BR:mgv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HFMG94VAA_1803 (rpoB)
DNA repair and recombination proteins [BR:mgv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HFMG94VAA_1803 (rpoB)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpb2_45 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 DOCK-C2
Other DBs
NCBI-ProteinID: AFP75832
LinkDB
Position
300169..304341
AA seq 1390 aa
MKKNSAFHNTQYSPKVVRRDYSKVHNKYNPLNLPGIQVNAYKQFLEKELEEIIGSYFPIK
SPNGKYSVEFHGMKILDPQITKEEASAESKTYDASLYVNLSLVNHQTGTVKKISKKSAKS
KAEGIYFADIPLMTENGAFIVNGIEKFVVAQIVRSPGAYILNKSQVKLSNSRKRNQEGYI
CEVFPSKGTLMLFYIAENKDFVQAVVRDVGGESAKVFSITTLLKAFGLSEIKIKEIFNNN
DYILRSLESEFYNEKQILNEADIAQLIRDIESDRISKVKSLPIDQKWKNLVLDWYKLNQE
KQELLNSSNPNPTKIESLNTHIGVVLRKLICEKAAKHVIQELSISTRSLDNVSQKEEISY
QSILLQHFFQKKRYDLSSAGRHKFVRKLRVSERLYQRTIAQDIKDLDGNVVIKQGTLMLK
EQLDLFKRLSKEKRLDIIKQIDFINPELNTQFTDVNTYEEVQIYVNNDLRNETTQIIGID
GSNESIETLTLADLISIVSYIVNLPFNIGLYDDIDHLGNKRLKLINELLKSKVQTGMMRI
EKYIKDKLQTADGNNKLADQDAENDPDSDLGTKSSNDLTVKSVINPKPFQIVIKDFFNTH
QLTQFLDQQNPLSELTNKRRISAMGPGGISREDPNLDIRDVHYSHYGRICPIETPEGMNI
GLIMSLAFYATIDKNGFLMTPYLKVENGKITDKVEHLTALREDEYIIAEASSYMDVAKDG
TINNEKIIARYRSSQDLYDPKQVDYIDVSPKQVVSVAASLIPFLENDDSSRALMGANMQR
QATPLLKPYSPLVGTGVEYKIAQDSGMLVTAKNPGTVTYVDASKITVKGEDNKSTDYNLL
KFVKSNKNTCYNQSPIVAVGDKIETNQALADGPSMKNGELALGQNVLVGFTTWSGYNYED
AVIISDRLFKDDVYSSIHIDEYTIECLRTKNGDEEITRDIPNISESAKRYLDEEGVIMVG
AEVKEGDILVGKTSPKGQVELTPEEKLIQAILGDKVKQVRESSLKVPNGGDGIVAGIKRF
SIANGDELEDDVLELVKVYVVQKRKIQIGDKVAGRHGNKGIISKIVAQEDMPHLEDGTPL
DILLNPLGVPSRMNIGQIFELHLGYAARELAKAKLIEACFDKKLADQLDTVFGLEKSKTQ
SLIKNLVEHMKSIGVTSLAQTKNRVRTIDIDIVLKQLGLTYDDLAFKIATPVFEGVNMED
LKAIMSEAGIDPDKTEGKFKLIDGRTGEPFEKPISVGIMYMLKLDHMVDDKIHARAVGPY
SKITQQPLGGKSQNGGQRFGEMEVWALQAYGAAHNLREILTIKSDDVRGRNMTYNAIVKG
LSIPEPGVPESFKLLTKELQGLGMTLNVLYDDDSIENINNISVVDESLEPKIHDAEFDTF
TLDDYNDDNF
NT seq 4173 nt   +upstreamnt  +downstreamnt
gtgaaaaaaaactcggcctttcataatactcaatattcaccaaaagtagttagaagagac
tattcaaaagttcataacaaatataaccccttaaatttaccagggattcaagtaaacgct
tataagcagtttcttgaaaaagaattagaagagatcatcggatcatacttcccaatcaaa
tcaccaaacggaaaatattctgtggaattccacgggatgaagatccttgatccacagatc
acaaaagaagaagctagtgcggaatcaaaaacctatgacgctagtctatatgttaattta
tctttagttaaccaccaaactgggacagtaaaaaagatcagtaaaaaatcagctaaatca
aaggctgaagggatctattttgctgatattccattgatgactgaaaacggagctttcatt
gttaatgggattgaaaagtttgttgttgctcagatcgtgagatcaccaggtgcttacatt
ctaaataagtcacaagttaaactatctaactcaagaaaacgtaaccaagaaggttatatc
tgtgaagtattcccttctaagggaacattaatgttgttctatattgctgaaaacaaagac
tttgttcaagcagttgtgcgtgatgttggtggtgaaagtgctaaggtattttcaattaca
acactacttaaagcctttggtttaagtgagattaagattaaggagatctttaataataat
gattacatcttaagatcattagaatctgagttttataatgaaaaacaaattcttaatgaa
gctgatatcgcgcaattaatccgcgatatcgaatcagatcggattagtaaagttaaatct
ttaccaatcgatcaaaaatgaaagaatttagttttagattgatacaaactgaaccaagaa
aagcaagaactactaaactcatctaacccaaatccaactaagatcgagtctttaaacacc
cacatcggtgttgttttaagaaaactaatctgtgaaaaggctgctaaacacgtaattcaa
gaactatcaatctcaacaagaagtcttgataacgtttcacaaaaagaagagatctcttac
caatcaatcttattacaacacttcttccaaaagaaacgttatgacctatcttcagcaggt
cgtcacaaattcgttcgtaaactaagagtttctgaacgtttataccaacgaacaattgct
caagatattaaagatcttgatggtaatgttgtaattaagcaagggacgttaatgcttaaa
gaacaacttgatttatttaaacgtttatcaaaagaaaaacgtttagatatcatcaagcag
atcgatttcattaacccagaacttaatacgcaatttactgatgtaaatacgtatgaagaa
gttcagatttatgttaataatgatctaagaaatgaaacaacccaaattattgggatcgat
ggatctaatgaatcgattgaaactttaactttagctgatctaatttcgatcgtttcatat
attgttaacttaccattcaatatcggtttatatgacgatattgatcatttaggcaataag
cgtttaaaactaattaacgaactattaaaatctaaagttcaaaccggaatgatgcggatt
gaaaaatacatcaaagataagttacaaactgcagatggtaataataagttagctgatcaa
gatgctgaaaacgatcctgattcagatcttggtactaagagtagtaatgatctaactgtg
aaatcagttattaatccaaaaccattccaaatcgtgattaaagatttctttaacacgcac
caattaacccaattcttagaccaacaaaacccattatctgaattaactaataagagaaga
atttcagcaatgggtcctggggggatctcacgggaagaccctaacttagatattcgtgac
gttcactactctcactatggaagaatctgtccgattgaaacccctgaagggatgaacatc
ggtttgattatgtcattagcgttttatgcgaccattgataagaacggtttcttaatgacc
ccttatctaaaagtagaaaacggtaagattacagataaagttgaacacttaactgcacta
agagaagatgaatatattattgcagaagcttcttcttatatggatgttgctaaagatgga
acgattaataacgaaaagattattgctagatatcgttcatctcaagatctatatgaccct
aagcaagtggattatatcgacgtttcaccaaaacaagttgtttcagtagcagcttcatta
attccgtttttagaaaacgatgactcttctcgggctttgatgggtgcaaacatgcaacgt
caagctacacctttactaaaaccttactctccattagttgggactggtgttgagtataag
atcgctcaagactcagggatgttagtaactgctaaaaatcctggaacagttacttatgtt
gatgcaagtaagatcactgttaagggtgaagataataaatcaactgattacaacttatta
aagtttgttaaatcaaataagaacacttgttataaccaatcaccgatcgttgctgttggt
gataagattgaaactaaccaagctttagctgatggtccatcaatgaaaaacggtgagctc
gcactaggacaaaacgttctagttggttttactacttgaagtggttataactacgaagac
gcagtgattatctctgaccgtttatttaaggatgatgtttattcatcaattcatatcgat
gaatacacgatcgaatgtttaagaactaaaaacggtgatgaagaaattactagagatatt
ccaaatatctcagaatcagctaagcgctaccttgatgaagaaggtgtgattatggttggg
gctgaagttaaagaaggtgatatcttagtaggaaaaacttcaccaaaaggtcaagttgaa
ctaacccctgaagaaaaactgatccaagcaatcttaggtgataaggtaaaacaagttcgt
gaatcatcactaaaagtaccaaacggtggtgatgggatcgttgctggaatcaagcgtttt
agtattgctaatggtgatgaattagaagatgacgttttagaactagttaaggtttacgta
gttcaaaaacgaaagattcagatcggtgataaggttgctggtagacacggtaacaagggg
attatttctaagatcgttgcccaagaagatatgcctcaccttgaagatggaaccccactt
gatatcttattaaacccattaggggtgcctagccggatgaatattggtcagatctttgaa
ttacatttaggttatgcagctagagagttagctaaagctaaattaattgaagcttgtttt
gataagaaactagctgatcaattagacacagtatttggtttagaaaaatcaaaaactcaa
agtttaattaaaaacctagttgagcatatgaaatcaattggggtaactagtcttgcacaa
actaagaaccgcgttcgtacgatcgatattgatatcgtactaaaacaattaggtttaact
tatgatgatttagcatttaagattgccacaccagtatttgaaggtgtgaatatggaagat
ctaaaagcaatcatgtcagaagctgggatcgaccctgataagactgaaggtaagtttaaa
ctgatcgatggtcgaactggtgaaccgtttgaaaaaccaatctcagttggtatcatgtac
atgttaaaacttgaccacatggttgatgataagattcacgccagagcagttggtccttat
tctaagattacccaacaaccactaggtggtaagtcacaaaacggtggtcaaagatttggg
gagatggaagtgtgagcacttcaagcttatggtgctgcgcataacttaagagagatctta
acgattaaatcagatgacgttaggggaagaaatatgacctacaacgcgatcgttaaaggg
ttaagtattccagaacctggtgtacctgaatcatttaagttattaactaaagaacttcaa
ggtttaggaatgacgcttaatgtgttgtatgatgatgattcaatcgaaaatattaataat
atctctgtagtcgacgaaagtctagaaccaaaaatccacgatgccgagtttgacacattt
actttggatgactacaacgacgataacttctaa

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