Magnetospirillum gryphiswaldense MSR-1 v2: MGMSRv2__3028
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Entry
MGMSRv2__3028 CDS
T02960
Name
(GenBank) putative DNA polymerases
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mgy
Magnetospirillum gryphiswaldense MSR-1 v2
Pathway
mgy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MGMSRv2__3028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mgy03400
]
MGMSRv2__3028
Enzymes [BR:
mgy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
MGMSRv2__3028
DNA repair and recombination proteins [BR:
mgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MGMSRv2__3028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CDL00243
UniProt:
V6F6Y2
LinkDB
All DBs
Position
complement(3121019..3121810)
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AA seq
263 aa
AA seq
DB search
MPLDLSPHDLLRWYLDAGVDEAIGEVPVDRFAASAKAPPRPVAVAAAMPAPAPQPSAPPA
RHDGGTAAHVAAQCRDLAQLRQAMEAFDALPLKRTAMSTVFADGNPDADIMCIGEAPGQE
EDRQGLPFVGKSGKLLDRMLASIGLDRGSVYISNVVPWRPVDNRKPTADEVAVCLPFITR
HIELVDPKLLILFGGAAASALLGRSEGINRLRGRWFDYSSPGLPRPVAVMPTFHPAYLLR
TPAAKREAWRDLLAVRKRIDGHS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggacctctccccccacgatctgttgcgctggtatctggatgccggtgtggat
gaagccatcggcgaagtgccggtggatcgtttcgcagcttcggccaaggcgccgccacgc
ccggtggcggtggccgccgccatgccggcccctgccccgcagccctcggccccacccgcg
cgtcatgacggcggcaccgctgcgcatgtggcggcgcagtgtcgcgacctggcccaactg
cgtcaggccatggaggcgttcgacgccttgccgttgaagcgcacggccatgagcacggtg
ttcgccgacggtaacccggatgccgacatcatgtgcatcggcgaggcgccgggacaggag
gaggaccgccaaggcctgcccttcgtcggcaagtcgggcaagctgctcgatcgcatgctg
gcttccatcggcctggatcgcggcagcgtctatatcagcaacgtggtgccctggcgcccg
gtggacaatcgcaagccgacagcggacgaggtggcggtgtgtttgcccttcatcacccgt
catatcgagttggtcgaccctaaattgctgatcctgttcggcggcgccgccgcctcggcc
ctgctgggacgatccgagggcatcaaccgcctgcgcgggcgctggtttgattattcttcg
cccggtctgccgcgcccggtggcggtcatgcccacctttcatcccgcgtatctgttgcgc
actccggcggccaagcgcgaggcctggcgtgatctgctggccgtgcgcaagcgcatagac
ggacattcctaa
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