Mannheimia haemolytica D171: J450_10855
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Entry
J450_10855 CDS
T02747
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit C
KO
K03703
excinuclease ABC subunit C
Organism
mham
Mannheimia haemolytica D171
Pathway
mham03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J450_10855 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mham03400
]
J450_10855 (uvrC)
DNA repair and recombination proteins [BR:
mham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J450_10855 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
GIY-YIG
UVR
HHH
HHH_5
HHH_2
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AGQ39582
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Position
2237221..2239059
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AA seq
612 aa
AA seq
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MSEFNAKSFLLNVPHQPGVYRMYDSKGTIIYVGKAKDLKKRLASYFRSQLSSKKTEALVA
NLANIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYPYILLTKHKHPRLTAFRGS
KKIAGEYFGPYPNVTAVRETLNLLQKIFPIRQCEDTYYKNRSRPCLQYQIGRCLAPCVEG
CYSPVEYDQQVNLVRLFLQGKDHQVVEHLVQKMEDAAEALDFEGAARFRDQIQSVRAVQE
KQFVSNDRLDDLDIISIVYQNGIACVHILFVRQGKVLGNRSYFPKVPSNTDLTELADTFV
GQFYLQMNQHRTIPNQIVIDHQLSESKALSEILSEQAGHKVSILDNAIRGDKQRYLALAR
TNAMAALALQLKQESHIQSRYQALKEMLKMSEIKRMECFDISHTMGNQTVASCVVFDENG
PLKSDYRRFNIEGITGGDDYAAMEQALLKRYNRELPPEKIPDIIFIDGGKGQLNRALDVF
AKLDVEWDKSKPLLIGVAKGVERKAGLETLIISKWDKEIHLPPDSLALHLIQHIRDESHQ
HAISGHRKKRQKAFTESGLESIAGVGAKRRQALLKYLGGMQGVKSATLEEIQSVPGISKA
LAEVIFDTLKNS
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaatttaacgctaaatccttcctgttaaatgtgcctcaccaaccgggtgtttat
cgtatgtatgatagtaaaggcacgataatctatgtgggtaaagccaaagatttaaaaaag
cgtttagccagctattttcgtagccaactttccagtaaaaaaacggaagccttggtggca
aatcttgctaatattgaaacgacgatcactcattctgaaacagaggcgttactccttgaa
cataattatattaaggaaaatcagccgaaatataatgtgttgctcagagatgacaaatct
tatccttatattctgttaactaaacataagcatcctcgtttaacagcatttcgtggtagt
aaaaagatcgccggtgaatattttgggccttatccgaatgttacggcagttcgggaaaca
ctgaatttattgcaaaaaatttttcctattcgtcagtgtgaagatacttattataaaaac
cgttcacgaccttgcttacagtatcagatcggacgctgtttagccccttgtgtagagggc
tgttattcacccgttgaatacgatcagcaggttaatttggttcgtttgtttttacaggga
aaagatcaccaagtagtcgagcatctggtacagaaaatggaagatgcggcggaggctttg
gattttgaaggtgcggcacgttttcgggatcaaattcaatcagtaagagcggtgcaagaa
aaacaattcgtctctaatgataggctagatgatcttgatattatctcgatcgtttatcaa
aatgggattgcctgtgtgcatatcttatttgttaggcaaggtaaggtactaggcaatcgt
tcttactttccaaaagtgccaagtaatacagatttaaccgagctcgcagatacctttgtc
ggtcagttttatttacaaatgaaccagcaccgcaccatacctaaccaaattgtaattgat
catcaattaagtgaatctaaggcactcagtgaaattttaagtgagcaagcagggcataaa
gtcagcattttagataatgccatcagaggtgataaacagcgttatttagctttagcgaga
actaatgcaatggcagcattagctttacaacttaagcaagaatcccatattcaaagccgt
tatcaggcattgaaagaaatgttgaaaatgtcagagattaaaagaatggagtgctttgac
atcagtcatacaatgggcaaccaaacagtggcttcttgcgtggtgtttgatgaaaatggg
ccgctaaaatcggattaccgccgttttaacattgaggggattaccggaggtgatgattat
gcagcaatggagcaggctctcttgaaacgctataatcgagaattaccgccagaaaagatc
cctgatattatttttattgatggtggcaaagggcagttgaaccgagcgttagatgtcttc
gctaaacttgatgtggaatgggataaatcgaaaccgcttttaattggtgtggcaaaaggc
gtagaacgtaaagctgggctggaaactttaattatcagcaaatgggataaagaaattcac
ttaccgccagatagtcttgccttgcatttaattcagcatattcgagatgaatcccaccag
catgccattagtgggcatcgtaaaaaacgccaaaaggcctttaccgaaagtggattagaa
tctattgccggtgtcggtgcaaaacgccgacaagcgttgctaaaatatttaggcggaatg
cagggggtgaagtctgcaaccttggaagagattcaatcagttccgggaatttctaaagcg
ttggcagaggttatttttgatacattaaaaaatagttaa
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