Mycolicibacterium hassiacum: MHAS_00978
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Entry
MHAS_00978 CDS
T05715
Symbol
fpg1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase 1
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mhas
Mycolicibacterium hassiacum
Pathway
mhas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MHAS_00978 (fpg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhas03400
]
MHAS_00978 (fpg1)
Enzymes [BR:
mhas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MHAS_00978 (fpg1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MHAS_00978 (fpg1)
DNA repair and recombination proteins [BR:
mhas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MHAS_00978 (fpg1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
VCT89288
UniProt:
K5BGV8
LinkDB
All DBs
Position
1:1029268..1030143
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AA seq
291 aa
AA seq
DB search
MPELPEVEVVRRGLAAHVVDRTITAVRVHHPRAVRRHEAGPADLTARLLGARIIGTGRRG
KYLWLSLDDGAALVVHLGMSGQMLLGGTPNENHLRIAALLDDGTTLSFVDQRTFGGWLIA
DMVTVDGADVPAPVAHLARDPLDPWFDRDAVVTVLRRKHSEIKRQLLDQTVVSGIGNIYA
DEALWRARINGARPASSLSRPRLAELLDHAADVMRDALAQGGTSFDSLYVNVNGESGYFD
RSLDAYGREGEPCRRCGAAIRRERFMNRSSFYCPRCQPRPRRPRSRPPATE
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtcgaggtcgtccggcggggactggccgcgcacgtcgtcgac
aggacgatcaccgcggtgcgggtgcaccatccgcgcgcggtgcgccgccacgaggccggt
cccgccgacctgaccgcacggctactcggggcgcgcatcatcggcaccgggcggcgcggc
aagtacctgtggctgtcgctcgacgacggcgcggcgctggtggtgcacctcggcatgagc
gggcagatgctgttgggcggcacgcccaacgagaaccacctgcgcatcgccgcgctgctc
gacgacggcaccacgctgagcttcgtcgaccagcgcaccttcggcggctggctgatcgcc
gacatggtgaccgtcgacggcgccgacgtgcccgcgccggtggcgcatctggcccgcgat
ccgctcgacccgtggttcgaccgcgacgccgtggtgacggtgttgcggcgcaagcactcc
gagatcaagcgtcagctgctcgaccagaccgtggtgtcggggatcggcaacatctacgcc
gacgaggcgctgtggcgggcgcggatcaacggcgcccggccggcgtcgtcgctgagccgg
cccaggctcgcggaactgctcgaccacgccgccgacgtgatgcgcgacgcgctggcgcag
ggcggcacctcgttcgactcgctgtatgtgaacgtcaacggcgagtccgggtacttcgac
cggtcgctggacgcctacggccgcgagggtgagccgtgccggcgttgcggggcggcgatc
cggcgggagcggttcatgaaccggtcgtcgttctactgcccgcgctgccagccccgtccg
cggcgcccgcgctcccggcctcccgcaacggaatag
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