KEGG   Mycolicibacterium hassiacum: MHAS_03407Help
Entry
MHAS_03407        CDS       T05715                                 

Gene name
ligD_1
Definition
(GenBank) Multifunctional non-homologous end joining protein LigD
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mhas  Mycolicibacterium hassiacum
Pathway
mhas03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mhas00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    MHAS_03407 (ligD_1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mhas03400]
    MHAS_03407 (ligD_1)
Enzymes [BR:mhas01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MHAS_03407 (ligD_1)
DNA repair and recombination proteins [BR:mhas03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     MHAS_03407 (ligD_1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: VCT91689
UniProt: A0A3P4A1T3
LinkDB All DBs
Position
1:complement(3599591..3601858)
Genome map
AA seq 755 aa AA seqDB search
MKLTNPDKVLYPATGTTKAEVFEYYINIAEAMIPHIAGRPVTRKRWPNGVEQASFFEKQL
ASSAPDWLDRATVAHRSGSTTYPLIDSVEGLAWIAQQAALEVHVPQWRFIGEGARRHPGP
ATRIVFDLDPGEGVSFRLLCRVAREVRDLIADIGLTTYPLTSGSKGLHLYVPLAEPISSR
GASVLARRVAQQLEQIMPNQVTATMTKSLRTGKVFVDWSQNNAAKTTIAPYSLRGREHPT
VAAPRTWEEIDDPKLRHLAFDEVLDRVAELGDLLAELDEKVPIADRLTTYRSMRDAARTP
EPVPIKPPKPGGNNRFVIQEHHARRLHYDLRLERDGVLVSWAVPKNLPDTPSVNHLAVHT
EDHPLEYLTFEGTIPKGEYGAGRMVIWDTGTYEAEKFHDVPPDEPGAGGEVIVTLHGTKI
DGRYALIQTDGKNWLAHRMKDQKNPRAADLAPMLATEGSISRLTAGQWAFEGKWDGYRVL
VDADHGRLEVRSRSGRDVTAEFRQFEALAADLADHHVILDGEAVALDESGVPSFGEMQNR
ARSTRVEFWAFDVLYLDGRSLLRAKYADRRRVLETLAEGGGLIVPDLLPGDTGAEAMEYA
RKKGWEGVIAKRLDSTYQPGRRSKSWLKDKIWNHQEVVIGGWRRGEGGRSSDIGSLLMGI
PVEGGLQFVGRIGTGFTEKELDKLKKLLEPLATDESPFTERLSGVDARGVSYVRPELVGE
VRYSERTSDNRLRQASWRGLRPDKRPDEVVWEQNG
NT seq 2268 nt NT seq  +upstreamnt  +downstreamnt
gtgaaactcaccaacccggacaaggtgctctatccggcgacgggcaccaccaaggccgag
gtcttcgagtactacatcaacatcgccgaagccatgatcccgcacatcgccggccgtccg
gtgacccgcaaacgctggcccaacggggtggagcaggcgtcgttcttcgagaagcaactc
gcctcgtcggcaccggactggctggaccgggccaccgtggcgcaccgctccggttcgacc
acctatccgctgatcgactcggtcgaagggctggcgtggatcgcgcagcaggccgccctg
gaggtgcacgtcccgcagtggcggttcatcggtgagggcgcccgccgccatccgggtccg
gccacccgcatcgtgttcgatctcgaccccggcgaaggcgtgtcgttccgcctgctgtgc
cgggtggcgcgcgaggtgcgggacctgatcgccgacatcgggctgaccacctatccgctc
accagcggcagcaagggcctgcacctgtatgtgccgctggcggagccgatcagctcgcgc
ggcgcgtcggtgctcgcgcgccgggtggcccagcagctcgaacagatcatgcccaaccag
gtcaccgcgacgatgaccaagagcctgcggacgggcaaggtgttcgtcgactggagccag
aacaacgccgccaagaccacgatcgcgccgtactccctgcgcgggcgggaacaccccacc
gtggccgcgccgcgcacctgggaggagatcgacgacccgaaactgcggcacctggccttc
gacgaggtgctcgaccgggtggccgaactcggcgacctgctggccgaactcgacgagaag
gtgccgatcgccgaccggctcaccacctaccgcagcatgcgggatgcggcgagaacccct
gagccggtgccgatcaagccgccgaagccgggtggcaacaaccggttcgtgatccaggaa
catcatgcccgccggctgcactacgacctgcggctcgaacgcgacggggtgctggtcagc
tgggcggtgccgaagaacctgcccgacaccccgtcggtgaaccatctcgcggtgcacacc
gaagaccacccgctggagtacctcaccttcgagggcaccatcccgaaaggcgagtacggt
gcgggcaggatggtcatctgggacaccggtacctacgaggccgagaagttccacgacgtt
ccacccgacgaaccgggagcgggcggcgaggtgatcgtcaccctgcacggcaccaagatc
gacggccggtacgcgctgatccagaccgacggcaagaactggctggcgcaccggatgaag
gaccagaagaacccccgcgcggccgatctcgcgccgatgctcgcgaccgaggggtcgatc
tcccggctgaccgccggccagtgggcgttcgagggcaaatgggacggctaccgggtgctt
gtcgacgccgaccacggccggctcgaagtgcgttcccgcagcggccgcgacgtcaccgct
gagttccgccaattcgaagcgctggcagcagatctcgccgaccatcacgtcatcctcgac
ggggaggcggtggcgctcgacgagagcggggtgccgagtttcggcgagatgcagaaccgg
gcccgctccacccgcgtcgagttctgggccttcgacgtgctctacctcgacggccgatcg
ttgttgcgggccaagtacgccgaccgccgccgggtgctcgagacgctggccgagggcggc
ggcctgatcgtgcccgacctgctgcccggcgacaccggtgcagaggcgatggagtacgcg
cgcaagaagggctgggagggggtgatcgccaaacggctcgactccacctatcagccggga
cgccggtcgaagtcgtggctgaaggacaagatctggaaccaccaggaggtggtgatcggc
ggctggcgccgaggggagggcggccgctccagcgacatcgggtcgctgctcatgggcatt
cccgtcgagggcggactgcagttcgtcggccgcatcggcaccgggttcaccgagaaggaa
ctcgacaagctcaagaaactgctcgagccactggctaccgacgaatcgccgttcaccgag
cggctttccggcgtcgacgcgcgcggcgtaagctacgtccggccggaactggtgggtgag
gtccgctacagcgagcggacatcggacaacaggctgcggcaggcgagctggcggggactg
cgcccggacaaacgtcccgacgaagtggtgtgggagcagaacggatag

DBGET integrated database retrieval system