Methylocystis heyeri: H2LOC_001615
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Entry
H2LOC_001615 CDS
T06290
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mhey
Methylocystis heyeri
Brite
KEGG Orthology (KO) [BR:
mhey00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhey03032
]
H2LOC_001615 (topA)
03400 DNA repair and recombination proteins [BR:
mhey03400
]
H2LOC_001615 (topA)
Enzymes [BR:
mhey01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H2LOC_001615 (topA)
DNA replication proteins [BR:
mhey03032
]
Prokaryotic type
DNA Topoisomerases
H2LOC_001615 (topA)
DNA repair and recombination proteins [BR:
mhey03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H2LOC_001615 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Toprim_4
EH_Signature
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QGM44497
UniProt:
A0A6B8K9T6
LinkDB
All DBs
Position
complement(372936..375821)
Genome browser
AA seq
961 aa
AA seq
DB search
MNVVIVESATKAETINKYLGRDYSVIACYGHVRDLPPKDGSVDPEDDFAMIWEMDAKGAK
RVAAIAEQVKKADRVILATDPDREGEAISWHLLDILNKKRALKDKAIERVVFNAVTKDAI
KEAMAHPRQIDQALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
ELEIEKFIAREYWSLVAHLKTRAGEPFTARLVGADGKKIARLDIGQGEEAQAFKKALDAA
GFTVRSVESKPVKRHPYAPFTTSTLQQEASRKLGLAPAQTMRIAQRLYEGVNIGGETAGL
ITYMRTDGVDMAPEAVASVRRVIAKEYGDRFVPNAPRKYTAKAKNAQEAHEAIRPTDASR
LPKHIAKYLEADQARLYELIWVRTIASQMESAELERTTVEIEAKAGSRILDLRATGQVVR
FAGFLEVYQEGRDDEADEDSARLPAMAEGEPVTKDKIDATQHFTEPPPRFTEATLVKRME
ELGIGRPSTYASTLAVLRERDYVRLDKKRLVPEDKGRLVVAFLEAFFTRYVEFDFTADLE
EQLDRVSNNEIDWKAVLRDFWKDFSAAVDGTKELRTTQVLDSLNDLLGPHIFPTKADGGD
PRACPSCSNGKLSLKLGKYGAFIGCSNYPECRYTRTLSPPTGDAAESARPGVKVLGQDPE
TGAEITLREGRFGAYVQEGEQEDGNEKPRRSSLPKNIKPDDLTLQQAIALLSLPREVAKH
PTTGVPIVAGLGRFGPYVQHGKTYANIGRDEDVLTIGGNRAIDLIIEKESGGGGSRFGRT
SDPGRALGDHPEGGAVSVKSGRFGPYVSWGKVNATLPKGTDAASVTLEQAIEMLAAKAAG
GGGSAGGKSLGEHPEGGAITVRAGRFGPYVNHGKVNATLPKGMTIDEVTLDEAIRLIEEK
GGPVKKKAPAKKKPAAKAAAKPKKAIEDSDETPFDDAKPIKKAATKKAPAKKTATKKAAG
G
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtcgtcattgtcgaatcggcgaccaaggctgaaacgatcaataaatatctcggc
cgggattacagcgtgatcgcctgctacggccacgtccgcgaccttccgccgaaggacggg
tcggtcgatcccgaagacgacttcgccatgatctgggagatggacgccaagggcgccaag
cgcgtggcggcgatcgcggaacaggtgaaaaaggccgacagggtcatcctggcgaccgac
ccggatcgcgaaggcgaggccatctcctggcatctgctcgacatattgaacaagaagcgc
gccttgaaggacaaggccatcgagcgcgtcgtgttcaacgccgtcaccaaggacgccatc
aaggaggcgatggcccatccccgccagatcgaccaggccctggtcgacgcctatctcgcg
cgccgggcgctggattatctggtcggcttcaccctgtctcccgtgctctggcgcaagctc
cccggcgcgcgctcggccggccgcgtccaatcggtggcgctgcggctggtctgcgaccgc
gagctggagatcgagaaattcatcgcgcgcgaatattggtcgttggtcgcgcatctgaag
acgcgggccggagagcccttcaccgcccgcctcgtcggcgccgacggcaagaagatcgcc
cgcctcgacatcggccagggcgaggaggcgcaggcgttcaagaaggcgctcgacgctgcg
ggtttcaccgtccgctccgtggaatcgaagccggtgaagcgccatccttacgcgcctttc
accacctccacgctgcagcaggaagcctcccgcaagctcggcctcgcgcccgctcaaacc
atgcgcatcgcgcagcgcctctatgaaggcgtgaacatcggcggcgaaaccgccggcctc
atcacctatatgcgaaccgacggcgtcgacatggctcccgaggccgtggccagcgtccgc
cgggtgatcgccaaggaatatggcgaccgcttcgtccccaacgccccgcgcaaatacacg
gccaaggccaagaacgcccaggaagcccatgaggcgatccgccccaccgacgcctcccgc
ctgcccaagcatatcgccaaatacctcgaggccgatcaggcgaggctctatgagctgatc
tgggtgcgcacgatcgcgagccagatggaatcggccgagctcgaacgcaccacggtcgag
atcgaggcgaaggcgggttcgcgcattctcgatttgcgcgccaccgggcaggtggtgaga
ttcgccggcttcctggaggtctatcaggaggggcgcgacgacgaggccgacgaggacagc
gcccgtcttccggcgatggcggaaggcgagccggtcacaaaagacaagatcgacgccacg
cagcatttcaccgagccgccgccgcgctttaccgaggcgaccctggtcaagcgcatggag
gagctcgggatcggtcgtccctcgacctatgcctcgaccctcgccgtgctgcgcgagcga
gactatgtccggctcgacaagaagcgcctcgtgcctgaagacaagggccggctggtggtg
gcctttctcgaggccttcttcacccgctacgtcgaattcgacttcaccgccgatctcgag
gaacagctcgaccgcgtctccaacaacgagatcgactggaaggcggttctgcgggatttc
tggaaggatttctccgccgccgtcgacggcaccaaggagttgcgcaccacccaggtgctc
gacagcctgaacgacctcctgggcccgcatattttcccgaccaaggccgacggcggcgac
ccgcgcgcctgcccctcctgctccaacggcaagctttcgctcaagctggggaaatacggc
gccttcatcggctgctcgaattatcccgagtgccgctatacccgcacgctgtcgccgccg
accggcgacgccgccgaaagcgcccgccccggcgttaaagttctgggccaggaccccgaa
accggcgcggaaatcacgctgcgcgagggccgtttcggggcctatgtgcaggaaggcgaa
caggaagacggcaacgaaaagccccggcgctcctcgctgcccaagaacatcaaaccggac
gacctcacgctgcagcaggcgatcgcgctcttgtcgcttccccgcgaggtcgccaagcac
ccgaccacgggagtgcccatcgtcgcgggtctcggccgcttcggcccctatgtccagcac
gggaagacctacgccaatatcggccgcgacgaagacgtgctcacgatcgggggcaatcgc
gcgatcgatctcatcatcgagaaggaatcgggcggcggcggctcgcgcttcggacgcacg
agcgatccgggacgggcgctgggagatcaccccgagggcggcgccgtctcggtgaaatcc
gggcgcttcggcccctatgtgagctggggcaaggtcaacgcgaccctgccgaaaggaacc
gacgccgcctccgtcactctggagcaggcgatcgaaatgctggcggccaaagccgcgggc
ggcggtggctcggcggggggcaaatcgctgggcgagcaccctgagggcggcgccataacg
gtccgggccggacgcttcggcccctatgtcaatcacggcaaggtcaacgccacgctgccc
aagggcatgaccatcgacgaggtgacgctcgacgaagcgatccgcctcatcgaggaaaag
ggcgggccggtgaagaagaaagcgccggccaaaaagaagcccgccgcgaaggccgccgcc
aagcccaaaaaggcgatcgaagatagcgacgagacgcccttcgacgacgcaaaaccgatc
aagaaagcggcgacgaaaaaggctcccgccaaaaaaacggcgacgaaaaaggcggcgggg
gggtag
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