Methanothrix harundinacea: Mhar_1518
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Entry
Mhar_1518 CDS
T01990
Name
(GenBank) putative endonuclease 4
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mhi
Methanothrix harundinacea
Pathway
mhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mhar_1518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mhi03400
]
Mhar_1518
Enzymes [BR:
mhi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Mhar_1518
DNA repair and recombination proteins [BR:
mhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mhar_1518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
NAGPA
Motif
Other DBs
NCBI-ProteinID:
AET64880
UniProt:
G7WP39
LinkDB
All DBs
Position
1641845..1642693
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AA seq
282 aa
AA seq
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MVKVGVHVSIAGSIDLAVDRAEKAGCDTFQIFSRNPRGWRFKEIPEEVAMEFRRKLALTG
ISPVVDHMPYLPNLATPKEDVYARSVEALAEELERCAILGIPYLVTHLGSHLDSGKEGGF
ERTAEGISRALSSVENEVILLLETTSDSKNSVGGSFEDLAEIMRRVGREDRVGACFDTCH
AFVAGYELRTAEGAAETMESFDEAVGISRLKVVHLNDSKGPLGSKLDRHEHIGLGEIGEE
GFRQILRHPAIRSRPLILETPVDERRDDRGNIALVRKLAGGD
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggtaggggttcacgtctccatcgccggctcgatagatttggcggtggacagg
gcagaaaaggccggttgcgatacgttccagatattctcccgaaacccccgggggtggcgg
ttcaaggagatccccgaggaggtggcgatggagttcaggaggaagctagcgctcaccggg
atctccccggtcgtagaccacatgccctacctccccaacctcgcgacgccgaaggaggat
gtttacgccagatccgtggaggccctcgccgaggagctggagaggtgcgccatcctgggg
atcccatacctggtgacccacctcggaagccatctcgactccggcaaggaggggggtttt
gagaggacggcggaggggatctccagggccctctcctccgtcgagaacgaggtcatcctc
cttctggagactacctccgactcgaagaacagcgtcggagggtccttcgaggacctggcg
gagatcatgaggcgggtcggccgggaggatcgggtcggggcgtgcttcgacacctgccac
gccttcgtcgccggatacgagctgaggacggcggagggggcggccgagacgatggagagt
ttcgatgaggcggtggggatatcgaggctgaaggtcgtccacctcaacgactccaagggg
cccctcggctcgaagctcgaccggcacgagcacataggcctcggggagatcggcgaggag
gggttccggcagatcctccgccaccccgccataaggtcccgccccctgatcctggagacc
cccgtcgacgagaggagggacgaccgggggaacatcgccctggtgaggaagcttgcgggg
ggggattag
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