Mycolicibacter hiberniae: MHIB_21740
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Entry
MHIB_21740 CDS
T06801
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mhib
Mycolicibacter hiberniae
Pathway
mhib03030
DNA replication
mhib03410
Base excision repair
mhib03420
Nucleotide excision repair
mhib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mhib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MHIB_21740 (ligA)
03410 Base excision repair
MHIB_21740 (ligA)
03420 Nucleotide excision repair
MHIB_21740 (ligA)
03430 Mismatch repair
MHIB_21740 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mhib03032
]
MHIB_21740 (ligA)
03400 DNA repair and recombination proteins [BR:
mhib03400
]
MHIB_21740 (ligA)
Enzymes [BR:
mhib01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MHIB_21740 (ligA)
DNA replication proteins [BR:
mhib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MHIB_21740 (ligA)
DNA repair and recombination proteins [BR:
mhib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MHIB_21740 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MHIB_21740 (ligA)
MMR (mismatch excision repair)
DNA ligase
MHIB_21740 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MHIB_21740 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
HHH
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBZ23756
UniProt:
A0A7I7X258
LinkDB
All DBs
Position
complement(2297417..2299495)
Genome browser
AA seq
692 aa
AA seq
DB search
MVSPQADSVTPELRRQWHDLAEEVREHQFRYYVKDAPIITDAAFDELFNRLLALEDAYPE
LRTADSPTQLVGGAGFTTDFAPAEHLERMLSLEDVFSPDELTAWAARVTAEIGGDTTYLC
ELKVDGVALGLVYRNGRLSSGATRGDGRVGEDVTLNARTIADIPEFLTDSPEFPIPAVLE
VRGEVYFRLEDFETLNAGLVAEGKAPFANPRNSAAGSLRQKNPAVTARRNLRMVCHGLGY
AEGFNPETLHAAYTAMRAWGLPVSPHTARVEGMDAVAERIGYWGEHRHDVEHEIDGVVVK
VDDRALQRRLGATSRVPRWAVAYKYPPEEAQTTLVDIRVSVGRTGRVTPFAYMTPVKVAG
STVSLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVELRDGAEREFVMPTHCPE
CGTLLAPAKEADVDIRCPNARSCPAQLRERVFHVAGRGAFDIEALGYEAATALLSAGVIT
DEGDLFTLTEDDLLRTALFTTKGGALSKNGRQLLANLDKAKSQPLWRVLVALSIRHVGPT
AARALATEFGSLDAITAASTDQLAAVEGVGPTIAAAVTEWFDVDWHRAIVDKWRAAGVRM
ADERDESIARTLEGVSIVVTGSLAGFSRDQAKEAIIARGGRAAGSVSKKTAYLVAGDAPG
SKYDKAVELGVPVLDEAGFVNLLAEGPPPGSN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
gtggtgagtccacaggccgacagcgtgaccccggaactccggcggcagtggcacgacctg
gctgaagaggtgcgcgaacaccagttccgctactacgtcaaggacgcgccgatcatcacc
gacgcggccttcgacgagctgttcaaccgactgctcgcgctggaggatgcctacccggag
ctgcgcaccgccgactcgccgacccagctggtcggcggcgcgggtttcaccacggatttt
gcgcccgccgagcacttggagcggatgctgtccctggaggacgtgttctcgcccgacgag
ctgaccgcctgggcggcacgggtcaccgccgagatcggcggcgacaccacgtatctgtgc
gagctcaaggtcgacggcgtggccctcgggttggtctaccgcaacggtcggttgagcagc
ggggccacccgtggcgacggcagggtcggtgaggacgtgacgctgaacgcgcgcaccatc
gccgacatccccgaattcctcaccgacagtccggaattccccattccggccgtgctggag
gtacggggcgaggtgtacttccggctcgaggacttcgagactctcaacgccgggctcgtc
gccgagggcaaggcgccgttcgccaacccacgtaacagcgcggccggatcactgcggcag
aagaacccggcggtcaccgcccggcgcaacctgcggatggtctgccacggcctcggctac
gcggaggggttcaaccccgagaccctgcacgccgcctacaccgcgatgcgggcctggggt
ctgccggtctccccgcacaccgcccgcgtcgagggtatggatgcggtggccgagcgcatc
ggctactggggcgaacatcgtcacgacgtcgaacacgaaatcgacggtgtggtggtcaaa
gtggacgaccgggcactgcagcgccgtctcggcgccacctcccgggtgccgcgctgggcg
gtcgcctacaaatacccgcccgaggaggcgcagaccacgctggtcgacattcgggtgagt
gtcgggcgcaccgggcgggtcaccccgttcgcctacatgaccccggtcaaggtcgccggc
tccaccgtcagccttgccaccttgcacaacgcctcggaagtcaagcgcaagggtgtgctg
atcggcgacacggtggtgatccgcaaggccggtgacgtgattcccgaggtgctgggaccc
gtggtcgagctgcgcgacggcgccgagcgggagttcgtgatgccgacccactgcccagaa
tgcggaacgctgctggcgccggcgaaggaagccgacgtcgacatccgctgtcccaatgcc
cggtcctgcccggcgcagttgcgcgagcgggtcttccacgttgccggccgcggagctttt
gacatcgaggccttggggtatgaagcggcgaccgcgttgttgagcgccggtgtcatcacc
gacgagggcgatctgttcaccctcaccgaagacgacctgctgcgtaccgcattgttcacc
accaaagggggggcactgtccaagaacggccggcagctgctggccaacctggacaaggcc
aaatcccagcccctgtggcgggtgttggtggcgttgtcgattcggcacgtcgggccgacc
gcggcccgggccctggccaccgagttcggcagcctggacgcgatcaccgcggcctctacc
gatcagttggccgccgtcgagggagtgggacccaccatcgcagccgccgtcacggaatgg
ttcgacgtcgactggcatcgcgcgatcgtcgacaagtggcgggcggccggggtgcggatg
gccgacgaacgcgacgagagcattgcgcgcaccctggagggtgtgagcatcgtggtgacg
ggctcgctggccgggttctcccgtgaccaggccaaggaggcgatcatcgcccgcgggggc
cgcgcggccggttcggtgtcgaagaagaccgcttacctggtggcgggtgatgcaccgggc
tcgaagtacgacaaggccgtcgaactcggggtgccggtcttggacgaggccggtttcgtc
aacttgctggctgagggcccgccacccggatcgaattag
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