Megasphaera hexanoica: ACT01_11135
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Entry
ACT01_11135 CDS
T05536
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
3.6.4.13
]
Organism
mhw
Megasphaera hexanoica
Pathway
mhw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mhw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACT01_11135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mhw03019
]
ACT01_11135
03009 Ribosome biogenesis [BR:
mhw03009
]
ACT01_11135
Messenger RNA biogenesis [BR:
mhw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACT01_11135
Ribosome biogenesis [BR:
mhw03009
]
Prokaryotic type
rRNA helicases
ACT01_11135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXB82744
LinkDB
All DBs
Position
2340704..2342260
Genome browser
AA seq
518 aa
AA seq
DB search
MLEKFQELNISEVIIRALNEMGFEEPTPIQAESIPVAMAGRDMIGQAQTGTGKTAAYGIP
VLEKILAAPPSKEIQTVILSPTRELAMQVAEEMNHLAQFTPIQALPIYGGQDMERQLRRL
RKCPQIIVATPGRLIDHMKRGTIQLSHISTIVLDEADEMLDMGFIDDINLIMGATPETRQ
TLLFSATMPKPIQELAENFLHDPKIIRMKAKEVTIDLIEQSYIEVPDRQKFDILCRLLDL
QEPDLAIIFVRTKRRVDEVSEALKKRGYSAEGIHGDLTQAKRDTVIRQFRERTIDILVAT
DVAARGLDISGVTHVFNYDLPQDPESYVHRVGRTGRAGQSGEATTFVIPREIEHLRTIER
LIKRRIQRRKAPTLSEALEGAQQTAIRNLVGAVESGEYGTYKENAEELLSNYDSTALVAA
AIKLLTKEPDTTPVKITEEAPLRVRTSRRQGSGRGNNRRRDHSQHSGKQHDGQRHFHSKG
NRDNRKKDTGDTARRVFKPRKKEHKEPTRSVFKPYFKD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgttagaaaaatttcaagaacttaatatcagtgaagtcatcatccgtgccctgaatgaa
atgggttttgaagaaccaaccccgattcaggcagaatccatacctgtcgccatggccggc
cgtgacatgattggccaggcacagaccggtacgggaaaaacagccgcctacggcatcccc
gtattggaaaaaatcctggcagccccacccagcaaagaaatccagacagtcatcttatcg
cctacacgcgaactggctatgcaggtagcggaagaaatgaatcatctggcccagttcaca
ccgattcaggcactgccgatttacggcggtcaggatatggaacggcagctgcgccggctc
cggaaatgtcctcaaatcatcgtcgccacaccggggcggctcatcgaccatatgaagaga
ggcactatccagctcagtcatatcagtacgattgtcctggacgaagccgatgaaatgctg
gatatgggatttattgatgatatcaatctcatcatgggagcgacaccggaaacgcggcag
acactgctcttttcggcgactatgcccaaaccgattcaggaactggcagaaaacttccta
cacgatcccaagattatccgcatgaaagccaaagaagtaaccatcgacttaatcgaacag
tcctacattgaagtgccggaccgtcagaaattcgatattctctgccgcctcctcgattta
caagaaccggatctggctattatcttcgtccgcaccaaacgccgcgtcgatgaagtatcg
gaagcactgaagaaacgcggttactcggcagaaggcatacacggcgatctgacacaggcc
aaacgcgatacggtcatccgccagttcagggaacgcacgattgatattctcgtcgctacc
gacgtggctgcccgcggccttgatatcagcggtgttacgcatgtatttaactacgatctg
ccccaggatccggaaagctatgtccatcgcgtagggcgtacgggtcgtgccggccagagc
ggcgaagcaacgacgttcgtcatccccagagaaatcgaacatctgcgtacgattgaacgg
ctcatcaaacgccgcatccagcgccgtaaggcacctacattatcggaagcactggaagga
gcccaacagacggctatccgcaatctggtcggtgctgtcgaatccggagaatatggaacc
tataaggaaaatgcggaagaattgctcagcaattatgacagcacggctctcgtcgccgcc
gccatcaaacttttgactaaagaaccggatacgacaccagtcaaaatcacggaagaagca
ccgctgcgcgtcaggaccagccgccggcagggatctggccggggaaataaccgtcgccgt
gaccacagccagcactcaggaaagcagcatgacggccagcgtcattttcattccaaaggg
aaccgggacaatcgtaaaaaagatacaggtgatacggcccgccgtgtttttaaaccgcgt
aaaaaagaacacaaagaacccacccgttctgttttcaagccctactttaaagattaa
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