Microbulbifer sp. THAF38: FIU95_08735
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Entry
FIU95_08735 CDS
T06274
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mict
Microbulbifer sp. THAF38
Brite
KEGG Orthology (KO) [BR:
mict00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mict03032
]
FIU95_08735 (topA)
03400 DNA repair and recombination proteins [BR:
mict03400
]
FIU95_08735 (topA)
Enzymes [BR:
mict01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FIU95_08735 (topA)
DNA replication proteins [BR:
mict03032
]
Prokaryotic type
DNA Topoisomerases
FIU95_08735 (topA)
DNA repair and recombination proteins [BR:
mict03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU95_08735 (topA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
QFT54635
UniProt:
A0A5P9EVM8
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Position
1972265..1974949
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AA seq
894 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFVVKSSVGHIRDLPTGGGNKQPVDAKERARRAAETR
KLSPEAKEVYKRKKNREQLIKRMGIDPDNGWQAHYEILPGKEKVVSELQKLAENADHIYL
ATDLDREGEAIAWHLREAIGGNDDRYRRVVFNEITKSAIQEAFKDPGRLNINRVHAQQAR
RFLDRIVGYMVSPLLWEKVARGLSAGRVQSVAVRLVVEREREIRAFIPEEYWTLFADTAT
NKANKLRLEVKKQAGEAFRPTNEVDAKSAVKLLQGSDFVVSARDDKPTSSKPGAPFITST
LQQAASNRLGFSVKKTMTLAQRLYEAGHITYMRTDSTNLSKEAVESARQYIGENFGDKYL
PENPNSYSSKEGAQEAHEAIRPSDVRVAPNMLSGMERDAERLYNLIWQQFVACQMTPAKY
TSTSIVVSAGEFELRARGRVIRFDGFLKVAPPAGKKDEDLVLPDVKVGEKLSLEQLDPKQ
HFTKPPARFSEAALVKELEKRGIGRPSTYASIISTIQDRGYVRLENRRFYAEKMGDIVTD
RLSESFKNLMDYGFTANLEESLDAVADGDKGWKQLLDEFYQDFSSRLEKAQSSDAGMRRN
TPTDTDIECSKCGRHMQIRTGSTGVFLGCSGYALPPKERCTNTMNLVSGDEAIDADKDED
AETRQLREKRRCPKCGTAMDSYLLDEHRKLHICGNNPDCNGYEVEQGTFKIKGYDGPIIE
CDKCGSDMQLKSGRFGKYFGCTNEACKNTRKLLKNGQPAPPKMDPVPMPELACQKVEDHY
ILRDGASGLFLAASQFPKNRETRAPLVKELLPHQSEIDPKYSFLFSAPAQDDQGRDTVVR
FSRKTQEQYVQSEEDGKATGWKAFYRDGAWKVEAASKSTAAKKKPAAKKVAAKK
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactggtcatcgtcgaatcgccggccaaagcgaaaactatcaataaatat
ctcggcaaggactttgtggttaagtccagcgtcggtcatattcgcgatttgccaactggt
ggcggcaacaaacagcccgttgatgcaaaagagcgggcaagacgtgcggctgagacccgt
aaactttcccctgaggcgaaagaggtctacaagcgtaagaaaaatcgtgagcaactgatc
aagcgcatgggtatcgacccagataatggctggcaggctcactatgaaatcctaccgggt
aaagagaaggtggtcagcgagttgcagaaacttgccgagaatgccgaccacatttacctg
gcaacggacttggaccgcgagggagaggccatcgcctggcacttgcgcgaagccattggt
ggcaatgatgatcgttatcgccgggtagttttcaatgagattaccaaatcggcaattcag
gaggctttcaaagaccccggccgcctgaatatcaatcgggttcatgctcagcaggcccgt
cgttttctcgatcgcatcgtgggctatatggtgtccccgctgttgtgggaaaaggttgcc
cgcggcctttccgccggtcgggtgcaatcggtagccgtgcgattggtggttgagcgcgag
cgtgaaattcgcgcctttatcccggaagagtactggacgctcttcgccgataccgccaca
aacaaagcgaacaagctccgccttgaagttaaaaagcaggctggagaagctttccgccct
accaatgaagtcgatgcgaaaagcgcggttaaattgttgcagggcagtgattttgttgtc
agtgctcgtgatgacaaacctacgagttccaagccaggggccccttttattacttcgacg
ctacagcaggcggcaagcaatcgccttggctttagtgttaagaaaactatgaccctagcg
cagcgcctctacgaagctggtcatatcacatacatgcgtaccgattcgactaatttgagt
aaagaggcggttgagtcggcccggcaatatatcggtgagaatttcggcgataagtatttg
ccggaaaatcccaatagctatagcagcaaagagggggcacaagaagcgcacgaggcaata
cgcccctccgatgtccgtgtcgcccctaatatgctttccggtatggagcgcgatgcagag
cggctctacaacctgatttggcaacagtttgttgcctgtcaaatgaccccggcgaaatac
acttcaacctctattgtggtgagcgctggtgaatttgagttgcgtgctcgcggtcgggtg
attcgctttgatggctttctcaaggtcgcgcctccggcaggtaaaaaagatgaggatcta
gtgctgcctgatgtgaaggtgggtgaaaagctctcactagagcagctagacccgaaacag
cactttacgaaaccaccagctcgcttcagtgaagcagccctggtaaaagagctggagaag
cgcggtattggccgaccctcaacctatgcctcgatcatttccactattcaggatcgtggc
tatgtgcggctagagaaccgccgtttttatgcggaaaaaatgggtgatattgtcaccgac
cgtctcagtgaaagttttaaaaacctgatggactacggttttaccgcaaacctggaggaa
tccctggatgcggtcgccgacggcgataaaggttggaagcagctgcttgatgagttttat
caggacttctcttcgcgactggaaaaggctcagtccagcgatgcgggaatgcgtcgcaac
acgccgacggataccgatattgaatgcagtaagtgcggtcgccatatgcagattcgtacg
ggttctaccggtgttttcctgggttgctccggttatgcgctgcctcccaaggagcgttgc
accaatacaatgaatctggtttccggtgatgaggcgatagacgcagataaggatgaggat
gcagaaacccgtcagctgcgggagaagcgccgttgtcccaagtgcggcacggcgatggat
agctatctgctcgatgagcatcgcaaactgcatatctgtggtaacaatccggactgtaat
ggatacgaggtggagcagggcacgttcaaaatcaagggttatgacggcccgattattgag
tgtgataaatgcggaagcgatatgcagctgaagtctggccgctttggtaaatattttggc
tgcactaatgaagcttgcaagaacacccgtaagctgttgaagaatggccagccggcacca
ccgaagatggatccggtgcccatgcctgagttggcatgccagaaggttgaagaccattac
attcttcgtgatggcgcctccgggttattcctggctgccagtcagttcccgaaaaaccgt
gaaacccgcgcaccgctggtcaaagagttgctacctcaccaaagtgagatcgatcccaag
tacagtttcttgttctctgcacctgcacaggatgatcaggggcgggataccgtggttcgc
tttagtcgcaagacccaagagcaatatgtccagtccgaggaggatggaaaggcgacgggt
tggaaggctttctatcgagatggcgcctggaaggttgaggcggcaagtaagtctactgca
gctaagaaaaagcctgcagcgaagaaagtggcggcaaaaaagtaa
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