Microbacterium sp. BH-3-3-3: BJP65_00365
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Entry
BJP65_00365 CDS
T04827
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mih
Microbacterium sp. BH-3-3-3
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mih03019
]
BJP65_00365
03009 Ribosome biogenesis [BR:
mih03009
]
BJP65_00365
Messenger RNA biogenesis [BR:
mih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BJP65_00365
Ribosome biogenesis [BR:
mih03009
]
Eukaryotic type
Pre-60S particles
RNases
BJP65_00365
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AOX44439
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All DBs
Position
complement(66947..67573)
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AA seq
208 aa
AA seq
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MVNASENDRLVWIDCEMTGLDLAVDELVEIAVVVTDFELNVLDPGFQIVIKPDDSALDNM
GEFVTDMHRSSGLLDEIPHGVSLADAEFQALEYIQRFAPVEGKAPLAGNTIGTDRMFLAK
YMPRVDRWLHYRNVDVSSIKELSRRWYPRAYFQAPAKHGGHRALADIRESIRELAYYRAA
VFVPQPGPTSDEAKVVSASAVSSFALDL
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgcctccgagaacgaccgtctcgtctggatcgactgcgagatgacgggactc
gacctcgcggtcgacgagctcgtcgagatcgccgtcgtcgtgaccgatttcgagctcaac
gtgctcgaccccggcttccagatcgtgatcaagcccgatgactccgcgttggacaacatg
ggcgagttcgtcaccgacatgcaccgctcgtcgggactgctcgacgagatcccccacgga
gtcagcctcgccgacgccgagttccaggcgctcgagtacatccagcggttcgcgcccgtc
gagggcaaggccccgctggcgggcaacaccatcggcaccgaccgcatgttcctcgccaag
tacatgccgcgcgtcgaccgctggctgcactatcgcaacgtcgacgtgtcgagcatcaaa
gagctgtcgcgccgctggtacccgcgcgcgtatttccaggcgcccgcgaagcacggcggg
caccgcgccctcgccgacatccgtgaatcgatccgcgaactcgcctactaccgcgccgcg
gtcttcgtgccgcagccgggtcccaccagcgacgaggcgaaggtcgtctcggcctcggcc
gtgtcgtcgttcgcgctggacctatga
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