Microbacterium sp. BH-3-3-3: BJP65_15285
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Entry
BJP65_15285 CDS
T04827
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mih
Microbacterium sp. BH-3-3-3
Pathway
mih03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BJP65_15285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mih03400
]
BJP65_15285
Enzymes [BR:
mih01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BJP65_15285
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BJP65_15285
DNA repair and recombination proteins [BR:
mih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BJP65_15285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AOX46979
LinkDB
All DBs
Position
3317466..3318311
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AA seq
281 aa
AA seq
DB search
MPEAPEVEALTLFLRERLGGHVVRDVELVEGRALKTRPRPLDELVGRTVTGVTRHGKHLD
LDFDGVHLGVGFGRAGWATWTDAGAESDVEPGSGSVDAVAPAAVIARLVLDDGILGITDA
GDWLSVQLHVVDAANEVPSVAKLGPDAIDPAFSREALAHALGGRRKQLKALLQEQESLAG
IGNAYSDEILFAARLSPVAHASSLSSDDVSRLHAALHDTLTAAVLARRGVPIAQQKAAKV
AAMAVHGRTGEPCPDCGGVIEDIPGTKGGGQYCPSCQVLPG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagcccccgaagtcgaggcgctcacgctgttcctgcgtgagcgcctcggcggg
cacgtggtgcgcgacgtcgagctcgtcgaggggcgtgcgctcaagacacggccgcggccg
ctcgacgagctcgtggggcgcaccgtgaccggggtgacccggcacggcaagcacctcgac
ctcgacttcgacggcgtgcacctcggcgtgggcttcggtcgggccgggtgggcgacgtgg
acggacgcgggcgccgagtccgacgtcgagcccggctccggttcggtggatgccgtcgca
ccggcggcggtgatcgcgcgcctcgtgctcgacgacggcatcctggggatcaccgacgcg
ggggactggctttcggtgcagttgcacgtcgtcgatgcggcgaacgaggttccgtcggtc
gcgaagctcggacccgatgccatcgaccccgcgttctcacgcgaggcgctggcgcacgct
ctcggcggacggcgcaaacagctcaaagcgctgctgcaggagcaggagtcgctcgccggc
atcggcaacgcgtactccgacgagatcctcttcgccgcccgactgtcgcccgtcgcgcac
gcgtcgagcctctcgagcgacgacgtctcgcggttgcacgcggcgctgcacgacacgctg
accgccgcggtgctggcgcggcggggcgtccccatcgcccagcagaaggccgccaaggtg
gcggccatggcggtgcacgggcgcacgggcgagccctgccccgactgcggcggtgtgatc
gaggacatccccggtacgaagggcggcgggcagtactgcccgtcgtgccaggtgctgccg
ggctga
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