Mycolicibacterium insubricum: MINS_13010
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Entry
MINS_13010 CDS
T06933
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mij
Mycolicibacterium insubricum
Pathway
mij03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mij00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MINS_13010 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mij03021
]
MINS_13010 (rpoC)
03400 DNA repair and recombination proteins [BR:
mij03400
]
MINS_13010 (rpoC)
Enzymes [BR:
mij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MINS_13010 (rpoC)
Transcription machinery [BR:
mij03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MINS_13010 (rpoC)
DNA repair and recombination proteins [BR:
mij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MINS_13010 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
TarH
DUF3958
Motif
Other DBs
NCBI-ProteinID:
BBZ65872
UniProt:
A0A7I8A158
LinkDB
All DBs
Position
1344136..1348086
Genome browser
AA seq
1316 aa
AA seq
DB search
MLDVNFFDELRIGLATADDIRNWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKIIYFAAYVITSVDEEMRHNELSTLEAEMVVEKKAVEDQRDADLEARAQKLEAD
MKELEDEGAKSDVKRKVRDGGEREMRQLRDRAQRELDRLDEIWTTFTKLAPKQLIVDENL
YRELQDRYGEYFEGAMGAESIKKLIETFDIDAEAELLRDIIKNGKGQKKLRALKRLKVVA
AFQQSGNSPLGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLIDL
GAPEIIVNNEKRMLQESVDALFDNGRRGRPVTGPGNRPLKSLSDLLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLRLHQCGLPKLMALELFKPFVMKRLVDLNHAQNIKSAKRMVERQR
PQVWDVLEEVIAEHPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCEAFNADFDGDQ
MAVHLPLSAEAQAEARILMLSSNNILSPSDGRPLAMPRLDMVTGLYYLTTEVPGDTGSYA
PATADAPETGVYSSPAEAIMAMDRGALSVRAPIKVRLSAQRPPADVETELFGENGWRPGD
AWTIQTTLGRVLFNELLPDGYPFANAQMHKKVQVSIINDLAERYPMIVVAQTVDKLKDAG
FYWATRSGVTVSMADVLVPPQKKEILDHYEGEADSIEKKYQRGALNHQERNEALVKIWQD
ATEKVGKALEDYYPEDNPITLLPKSGATGNMTQVRNLAGMKGLVTNPKGEYIPRPIKSSF
REGLTVLEYFINTHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREHDCGTERGITVP
IAEKQADGTLIRDPHVETSAFARTLAADALDADGNVVVERGHDLGDPAIDALLAAGITSV
KVRSVLTCTTGTGVCATCYGRSMATGQLVDIGEAVGIVAAQSIGEPGTQLTMRTFHQGGV
GGDITGGLPRVQELFEARVPRARAPIADVTGRVQLEESDKFYKITIVPDDGGEEVVYDKL
PRRQRLKVFKHEDGSERPLANGDHIEVGQQLMEGSADPHEVLRVMGPREVQVHLVDEVQD
VYRAQGVSIHDKHIEVIIRQMLRRVTIIDSGSTEFLPGSLTERGEFEAENRRVVAEGGEP
AAGRPVLMGITKASLATDSWLSAASFQETTRVLTDAAINCRSDKLNGLKENVIIGKLIPA
GTGIARYRNIAVQPTEEARAAAYTIPSYEDQYYSPDFGQATGAAVPLDDYGYSDYR
NT seq
3951 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgtcaacttcttcgatgaacttcgcattggcctggccaccgcggacgacatc
cgtaactggtcctacggcgaggtcaagaagccggagaccatcaactaccgcacgctcaag
ccggaaaaggacggcctgttctgcgagaagatcttcggaccgactcgcgactgggagtgc
tactgcggcaagtacaagcgcgtccggttcaagggcatcatctgtgagcgctgcggcgtc
gaggtgacccgcgccaaggtgcgccgcgagcggatgggccacatcgaactggccgcaccg
gtcacgcacatctggtacttcaagggcgtgccgagccggctcggctacctgctggacctg
gccccgaaggatctggaaaagatcatctacttcgcggcctacgtcatcacctcggtcgac
gaggagatgcggcacaacgagctgtccaccctcgaggccgagatggtcgtcgagaagaag
gccgtcgaggatcagcgcgacgcggacctggaggcccgggcgcagaagctcgaagccgac
atgaaggagctcgaggacgagggcgccaagagcgacgtcaagcgcaaggtccgcgacggc
ggcgagcgcgagatgcgccagttgcgcgaccgggcccagcgcgagctggaccggctcgac
gagatctggacgaccttcaccaagctggctcccaagcagctgattgtcgacgagaacctc
taccgcgagctgcaggaccgctacggcgagtacttcgaaggtgccatgggcgcggagtcg
atcaagaagctcatcgagaccttcgacatcgacgccgaggccgagttgctgcgcgacatc
atcaagaacggcaagggccagaagaagctgcgtgcgctcaagcggctcaaggtcgtcgcc
gcgttccagcagtccggcaactcgccgctgggcatggtgctcgacgccgtcccggtgatt
ccgccggagctgcgcccgatggtccagctcgacggtggccggttcgccacctccgacctc
aacgacctgtaccgccgcgtcatcaaccgcaacaaccgcctcaagcgactgatcgacctc
ggcgcccccgagatcatcgtcaacaacgagaagcggatgctgcaggagtccgtcgacgcg
ctgttcgacaacggccgtcgcggacgcccggtcaccggaccgggcaaccggccgctcaag
tcgctgtcggatctgctcaagggcaagcagggccggttccgccagaacctgctcggcaag
cgcgtcgactactcgggccgttcggtcatcgtggtcggcccgcagctgcgcctgcatcag
tgcggtctgcccaagctgatggcactggagctgttcaagccgttcgtgatgaagcgtctg
gtggatctcaaccacgcgcagaacatcaagagcgccaagcggatggtggagcgccagcgc
ccgcaggtgtgggacgtgctggaagaggtcatcgccgagcacccggtgctgctcaaccgc
gcacccaccctgcaccgcctcggtatccaggccttcgagccgcagctggtcgagggcaag
gccatccagctgcacccgctggtctgtgaggcgttcaacgccgacttcgacggtgaccag
atggcggtgcacctgccgctgagcgcggaggcgcaggccgaggcccgcatcctgatgctg
tcgtcgaacaacatcctgtcgccgtcggacggccgcccgctggccatgccgcgactggac
atggtgaccggcctgtactacctgaccaccgaggttcccggcgacaccggcagctacgcg
ccggccaccgccgacgccccggagaccggtgtgtacagcagcccggccgaggccatcatg
gcgatggaccgcggcgcgctgagcgtgcgggcacccatcaaggtgcggctgtccgcgcag
cgcccgccggccgatgtcgagaccgagctgttcggcgaaaacggctggcgtccgggtgac
gcgtggaccatccagaccacgctgggccgggtgctgttcaacgagctgctgcccgacggg
tacccgttcgccaacgcgcagatgcacaaaaaggtgcaggtctcgatcatcaacgatctg
gccgagcgctacccgatgatcgtggtcgcgcagaccgtcgacaagctcaaggacgcgggc
ttctactgggccacccgttccggcgtgacggtctccatggccgacgtgctggtgccgccg
cagaagaaggagatcctcgaccactacgagggcgaggccgactccatcgagaagaagtac
cagcgtggtgccctgaaccatcaggagcgcaacgaggctctggtgaagatctggcaggac
gccaccgagaaggtgggtaaggccctggaggattactacccggaggacaacccgatcacc
ctgctgccgaagtccggtgcgaccggcaacatgacccaggtacgcaacctggccggcatg
aagggtctggtcaccaaccccaagggtgagtacatcccgcggccgatcaagtcctcgttc
cgcgagggtctgacggtgttggagtacttcatcaacacccacggtgcccgtaagggtctg
gccgacaccgcgctgcgtaccgcggactcgggttacctgacccgtcgtctggtggacgtg
tcccaggacgtcatcgtccgcgagcacgactgcggcaccgagcgcggcatcaccgtcccg
atcgccgagaagcaggccgacggcacgctgatccgggatccgcacgtggagaccagtgcg
ttcgcccgcaccctggccgccgatgcgctggacgccgacggcaacgtcgtcgtcgagcgg
ggtcacgacctgggtgacccggcgatcgacgccctgctggccgccggcatcacctcggtc
aaggtccgctcggtgctgacctgcaccaccggcaccggcgtctgcgccacctgctacggc
cggtcgatggccaccgggcagctggtcgacatcggcgaggcggtcggcatcgtcgccgcc
cagtcgatcggtgagccgggtacccagctgaccatgcgtacgttccaccagggtggcgtc
ggtggcgacatcaccggtggtctgccgcgcgtgcaggagctgttcgaggctcgcgttccg
cgggcccgggccccgatcgccgacgtcaccggccgggtgcagctggaggagtccgacaag
ttctacaagatcaccatcgtccccgacgacggcggcgaggaagtcgtctacgacaagctg
ccccgtcgtcagcggctgaaggtgttcaagcacgaggacggctccgagcggccgctggcc
aacggcgaccacatcgaggtcggccagcagctcatggagggttcggccgatccgcacgag
gtgctgcgtgtcatgggcccgcgtgaggtgcaggtccacctggtcgacgaggtccaggac
gtgtaccgggctcagggtgtgtcgatccacgacaagcacatcgaagtgatcatccggcag
atgctgcgccgggtgaccatcatcgattccggttccaccgagttcctgccgggttcgctc
accgagcgcggcgagttcgaggcggagaaccgccgggtggtcgccgagggcggcgagccc
gcggccgggcgtccggtgctgatgggtatcaccaaggcctcgctggccaccgactcgtgg
ttgtcggcggcgtcgttccaggagaccacccgcgtgctgaccgatgcggcgatcaactgc
cgcagcgacaagctcaacggtctgaaggagaacgtgatcatcggcaagctgatcccggcc
ggcacgggcatcgcccggtaccgcaacattgcggtgcagccgaccgaggaggcccgggcc
gctgcgtacacgatcccgtcgtacgaggatcagtactacagcccggacttcggccaggcc
accggtgccgcggttccgctggacgactacggatacagcgactaccgctaa
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