KEGG   Micromonospora sp. L5: ML5_0458Help
Entry
ML5_0458          CDS       T01379                                 

Definition
(GenBank) DNA polymerase LigD, ligase domain protein
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mil  Micromonospora sp. L5
Pathway
mil03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mil00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    ML5_0458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mil03400]
    ML5_0458
Enzymes [BR:mil01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     ML5_0458
DNA repair and recombination proteins [BR:mil03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     ML5_0458
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_C DNA_ligase_OB_2 mRNA_cap_enzyme RNA_ligase
Motif
Other DBs
NCBI-ProteinID: ADU06009
LinkDB All DBs
Position
466905..467864
Genome map
AA seq 319 aa AA seqDB search
MRNYSQEVPGAPLKPMLATTGQLPAGAAWSYEFKWDGVRALADISRGDRHFYARSGVEIT
TAYPELLNLAEQVGDALLDGEVVLFTDGQPSFTALAERMHVRNPAKAARLAATAPVTYMI
FDLLRLDGVDLTARPWRERRAALESLGLGAARWAVPPVFGDGPATYAAAGEHGLEGVMAK
RVDSLYRPGVRSPDWVKVKLEVTADFVVGGWRPGARRVGGLLVGVPGPDGRLVYRGRVGG
GIGAALERELLRELEPLRATDSPFAAGVPREDARGAIWVTPRIVVEVKYGQRTPDGRLRF
PRILRLRPDKPPEEVDDAL
NT seq 960 nt NT seq  +upstreamnt  +downstreamnt
gtgcgcaactacagtcaggaggtgcccggcgcgccgttgaagccgatgctcgcgacgacc
gggcagctcccggccggcgccgcctggtcgtacgagttcaaatgggacggcgtccgcgcg
ctcgccgacatctcgcgcggcgacaggcacttctacgcccgctccggcgtcgagatcacc
accgcgtacccggaactgctcaacctggccgagcaggtcggcgatgcgctgctcgacggc
gaggtcgtcctcttcaccgacgggcagccctcgttcaccgcgctcgccgagcggatgcac
gtccgcaacccggccaaggcggcgcggctggcggcgacagcacccgtcacatacatgatc
ttcgacctgttgcggctcgacggcgtcgacctgaccgcccggccgtggcgggagcggcgg
gcggcgctggagtcgctcgggctcggcgccgcccggtgggcggtgccgccggtcttcggc
gacggcccggccacctacgcggcggccggcgagcacgggctggaaggggtgatggccaag
cgggtcgactcgctctaccggcccggcgtgcgctcgccggactgggtgaaggtcaagctg
gaggtcaccgccgatttcgtggtcggcggctggcggcccggcgcgcggcgcgtcggtggc
ctgctggtcggcgtgcccggcccggacggacggctggtctaccgggggcgggtcggcggc
gggatcggcgcggcgctcgaacgggaactgctgcgcgagctggaaccactgcgcgccacc
gactcgccgttcgccgccggcgtgccgcgcgaggatgcccggggcgcgatctgggtaact
ccccggatcgtggtggaggtcaagtacggccagcgcacgccggacggccggctgcgcttc
ccgcgcatcctgcgcctgcgcccggacaagccgcccgaggaggtcgacgatgccctctga

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