Micromonospora sp. L5: ML5_3921
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Entry
ML5_3921 CDS
T01379
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mil
Micromonospora sp. L5
Pathway
mil03030
DNA replication
mil03410
Base excision repair
mil03420
Nucleotide excision repair
mil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ML5_3921
03410 Base excision repair
ML5_3921
03420 Nucleotide excision repair
ML5_3921
03440 Homologous recombination
ML5_3921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mil03032
]
ML5_3921
03400 DNA repair and recombination proteins [BR:
mil03400
]
ML5_3921
Enzymes [BR:
mil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ML5_3921
DNA replication proteins [BR:
mil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ML5_3921
DNA repair and recombination proteins [BR:
mil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ML5_3921
NER (nucleotide excision repair)
GGR (global genome repair) factors
ML5_3921
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
ADU09432
LinkDB
All DBs
Position
4133759..4136488
Genome browser
AA seq
909 aa
AA seq
DB search
MSGVRTRVAAVTATTPRLLLVDGHSLAYRAFFALPVENFSTTTGQPTNAVYGFTSMLINV
LRDEQPTHIVVAFDVSRRSFRTDRYAEYKAGRSETPTDFKGQVSLVKEVLAALRVPVVEK
EGYEADDVIATLACQARDQGMDVLITTGDRDAFQLVGERVTVLYPRKGVSDLARMDPAAV
EAKYGVTPDRYRDLAALVGETSDNLPGVPGVGPKTAAKWINLYGGVEGVVARADEIKGKA
GDSLRERLADVIRNYEINCLVSDLELPVRPEDARWQGWDREAVHQVFDTLQFRILRDRLY
QYLEAVEPEAEAGFDLAGEVLTEPGALAGWLGTHAPAGAPVGLAVTLDTGPNRRHTATVT
AMALATAAGAGAWFDPSRLDADDEAALAGWLADAERPKVLHDSKPAVLAFAAHGWELQGI
ARDTQIAAYLARPDQRSYDLTDLALRYLHRELRVDAPETGQLTLDGLGDEGVAEQNLMLQ
ARATLDLADAIDAELSRDGEQSARLMAGVELPLMRVLATMERTGIAADTDYLSELEAHFA
AEVKAAAQGAYEVVGREFNLGSPKQLQEILFTELGLPKTKRIKTGYTTDADALQWLFAQT
EHPLLHHLLRHRDVAKLKSTVDGLLKSVSDDGRIHTTFNQTVAATGRLSSTEPNLQNIPI
RTEEGRRIRRAFVVGEGYECLLTADYSQIEMRIMAHLSSDDALIEAFNSGHDFHAATASS
VFTVEVGDVTADQRRKIKAMNYGLAYGLSAFGLSQQLGISAEEARGLMENYFAGFGGVRD
YLQEVVARARQDGYTSTILGRRRYLPDLVSDNRQRREMAERMALNAPIQGSAADIIKVAM
LHVDSALRDAGLRSRMLLQVHDELVFEVAPGERETLEALVRKQMGEAYPLSVPLEVSVGE
GHDWNSADH
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgggcgtacggactagagtcgcagccgtgacagctacgacgccgcgcctgctcctc
gtcgacggacactccctggcataccgggcgttcttcgccctgcctgtggagaacttctcc
accaccacggggcagccgaccaacgccgtctacggcttcacctcgatgctgatcaacgtg
ctgcgcgacgagcagccgacgcacatcgtcgtggcgttcgacgtctcccgccgctccttc
cgcaccgacaggtacgcggagtacaaggccggccgcagtgagaccccgaccgacttcaag
ggccaggtcagcctggtcaaggaggtcctcgccgcactgcgcgtgccggtggtcgagaag
gagggctacgaggccgacgacgtcatcgccacgctcgcctgccaggcccgcgaccagggc
atggacgtgctgatcaccaccggcgaccgggacgcgttccagctcgtcggcgagcgggtg
acggtgctctacccgcgcaagggcgtctccgacctggcccggatggacccggccgcggtc
gaggcgaagtacggcgtcaccccggaccgctaccgcgacctggccgcgctggtcggcgag
accagcgacaacctgccgggcgtgcccggcgtcggcccgaagaccgccgccaagtggatc
aacctgtacggcggcgtcgagggcgtggtggcccgcgccgacgagatcaagggcaaggcc
ggcgacagcctgcgcgagcggctggccgacgtgatccgcaactacgagatcaactgcctg
gtctccgacctggagctgccggtccgtcccgaggacgcccgctggcagggctgggaccgc
gaagcggtgcaccaggtcttcgacacgctccagttccgcatcctgcgtgaccggctctac
caatacctggaagcggtcgagccggaggccgaggcgggcttcgatctcgcaggcgaggtg
ctcaccgagccgggcgcgctcgcgggctggctcggcacgcacgccccggcgggcgcaccg
gtcggcctggcggtgacgctcgacaccggccccaaccgccggcacaccgccaccgtgacc
gcgatggcgctggccaccgccgccggcgcgggcgcctggttcgacccgagccggctggac
gccgacgacgaggccgcgctggccggttggctggccgacgcggagcgcccgaaggtgctg
cacgacagcaagccggcggtgctggcgttcgccgcgcacggctgggagcttcagggcatc
gcccgcgacacgcagatcgccgcctacctggcccgccccgaccagcgctcctacgacctg
accgacctggcgctgcgctacctgcaccgggagctgcgcgtcgacgcgccggagaccggt
cagctcactctcgacgggctcggcgacgagggcgtggccgagcagaacctcatgctccag
gcccgcgccacgctcgacctggccgacgcgatcgacgccgagctgtcccgcgacggcgag
cagtcggcccggctgatggccggcgtggagctgccgctgatgcgggtgctcgccaccatg
gagcgcaccggcatcgccgccgacaccgactacctctccgagctggaggcgcacttcgcc
gccgaggtgaaggccgccgcccagggcgcgtacgaggtggtcggccgcgagttcaacctc
gggtcgccgaagcagttgcaggagatcctcttcaccgagctgggcctgcccaagaccaag
cggatcaagaccggctacaccaccgacgccgacgcgctccagtggctgttcgcgcagacc
gagcacccgctgctgcaccacctgctgcgtcaccgcgacgtcgcgaagctcaagtcgaca
gtcgacgggctgctcaagtcggtctccgacgacggccggatccacaccacgttcaaccag
acggtggcggctaccgggcggctgtcctcgaccgagccgaacctgcagaacatcccgatc
cgcaccgaggaggggcggcggatccggcgcgcgttcgtggtcggcgagggctacgagtgc
ctgctcaccgccgactacagccagatcgagatgcggatcatggcgcacctgtcgtcggac
gacgcgctgatcgaggcgttcaactccgggcacgacttccacgccgccaccgcgtcgtcg
gtcttcacggtcgaggtcggcgacgtgaccgccgaccagcgtcgcaagatcaaggcgatg
aactacggcctggcgtacgggctcagcgcgttcggcctgtcccagcagctcggcatcagc
gccgaggaggcgcgcgggctgatggagaactacttcgccggcttcggcggggtgcgtgac
tacctccaggaggtggtggcccgcgcccgccaggacggctacacctccaccatcctgggc
cgccgccgctacctgcccgacctggtcagcgacaaccggcagcgccgggagatggccgag
cggatggcactgaacgccccgatccagggttcggcggccgacatcatcaaggtcgcgatg
ctgcacgtcgacagcgcgctgcgcgacgccgggctgcggtcccggatgctgctgcaggtg
cacgacgagctggtcttcgaggtcgccccgggcgagcgcgagacgctggaggcgttggtg
cgcaagcagatgggtgaggcgtacccgctgtcggtgccgctggaggtgtcggtgggcgag
ggccacgactggaacagcgccgaccactga
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