Mesotoga infera: MESINF_2742
Help
Entry
MESINF_2742 CDS
T05565
Symbol
rnr
Name
(GenBank) Ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
minf
Mesotoga infera
Pathway
minf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
minf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MESINF_2742 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
minf03019
]
MESINF_2742 (rnr)
03016 Transfer RNA biogenesis [BR:
minf03016
]
MESINF_2742 (rnr)
Enzymes [BR:
minf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
MESINF_2742 (rnr)
Messenger RNA biogenesis [BR:
minf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MESINF_2742 (rnr)
Transfer RNA biogenesis [BR:
minf03016
]
Prokaryotic type
tRNA degradation factors
MESINF_2742 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
SSC14182
UniProt:
A0A7Z7LIH9
LinkDB
All DBs
Position
MESINF:2869415..2871616
Genome browser
AA seq
733 aa
AA seq
DB search
MKLTLKSLRTHFNSPEYTPVTLKSLALQLGANDKTSKNELKTLLEEMTGTGEIVRDSRGR
YIVPGTNNLTGIIEFTRRGLGAFVIESGGEEIFIPPEETGFAIHGDTVMVEITGDYKDIH
RGRVIKVLKRNKTRVVGTFKTRGIFAFVVPDDVKLKNDFYIPPEEFNGAKPDDKVLIKIT
RYPTPGRNPEGSVERVLGDSSAPEVDLMTVIYRHDLPEPDEFPQEVSAQAKKISPTISER
DLKGRKDFRGEVVYTIDGEDAKDFDDAISLIRLENGNYLLGVHIADVSHYVFEGSAIDKE
AFSRGTSVYLLDTVIPMLPFELSNNICSLKPDEDRLTLSLIMELDQRGKLLSSKVEQGVI
RSTRRLTYTEVNEFLEGKASRDSLEKLEPVSKSLLLSHELASKLRDNRKKRGSVMDISSR
EVKIIFNDKGRVLDIVPQSRGISEWIIEEFMILANETVAELFNNRGLPFVYRIHEEPDAE
SMMQLKNYLEALGMNVKIPRNVQPKALQQILEKTKDHPLHTSIERVLVRGMKRAVYSENN
IGHFGLASQAYTHFTSPIRRYPDLVVHRLLKAFSSRGNGELTDEQREYEEKLPSIASWAS
KRERVANEAEWDLLDMKKVEYISNHIGEVFQGVITGLAKFGIFVEITEKMISGLVHISTL
DDYYDFIENQNILVGRKNKRIFRIGDDLKVQAVRADKTTMEIDFSIVEKEKKPVKKVSHE
QKNRSKKPKKHHK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaagctaactttgaaatcactgcgaacacacttcaactcacccgaatacactcccgtg
acgctgaagagccttgctctgcagctgggagcaaatgacaaaacttcgaaaaacgaatta
aaaaccctgctcgaagagatgactggtacaggtgagatagtgcgcgattccaggggcagg
tacatcgttcccggaaccaacaacctgaccggtatcatcgagttcacaaggcgcggcctt
ggcgccttcgtgatcgagtctggaggggaggagatcttcattccacctgaagagactggc
ttcgccattcatggagatacagtgatggtggagattacgggcgattacaaagacatccac
aggggaagggttatcaaggttctcaagcgaaacaaaacaagagtcgtgggaactttcaag
accagggggatcttcgccttcgtcgtaccggacgatgtgaagttaaagaatgacttttac
atccctccggaggaattcaacggcgccaaacccgatgacaaggtactgataaaaatcacc
agatatcccacgccgggcagaaaccccgaagggtcggtcgaaagggttctcggcgattct
agcgctcctgaggtcgatctcatgacggtgatataccggcacgatcttcccgaacccgat
gaattccctcaggaagtgagcgcacaggcgaagaagatctccccgacgatctcggaaaga
gatctgaaaggtcggaaggatttcagaggagaggtcgtgtacacgatcgacggcgaagac
gccaaggactttgacgacgctatctcactgatccgtctggaaaacgggaactacctgcta
ggagtgcacattgccgacgtctcgcattatgtctttgaaggttcggcgatagacaaggag
gccttctcgcggggaacttcagtctatctactcgacacagtaattccgatgctccccttc
gaactctcgaacaacatttgctcgctcaaacccgacgaagacagattgacgctttctctg
attatggagctcgatcaacgtggaaagctactttcctcgaaggttgaacagggtgttatc
cgttccacaagacggctcacatatactgaggtgaacgagtttctcgagggcaaagcctct
agagattctctcgaaaaacttgaaccggttagcaagagcctccttctctcgcacgaactg
gccagcaagctgcgtgacaaccgcaagaagcgcggttcggtgatggacatatcctcgcgc
gaggttaagattatcttcaacgacaaaggccgggtgctcgatatcgtgccccagtcgcgt
gggatttccgaatggatcatagaggagttcatgatactggccaacgaaacggtggccgaa
ctcttcaacaaccggggcctgccattcgtatatagaatccacgaggaaccggacgccgag
tcgatgatgcagctgaagaactacctcgaagccctgggcatgaacgtgaaaatcccgcgc
aacgtacagcccaaagcgttgcagcagatactggagaagacgaaagaccacccgctccac
acctcgatagagagagtactggtaagaggcatgaaacgcgccgtctactccgaaaacaat
atcggacacttcggtctggcctcacaggcctacacccatttcacctcgcctataaggagg
tatcccgacctggtcgtccacagactgctgaaggctttctcctcccgtggaaacggcgag
ctcaccgacgaacagagagagtacgaggaaaagctcccctcaatagcctcatgggcttcg
aaaagggagcgcgtcgccaacgaggccgaatgggatctgctagacatgaagaaagtcgaa
tatatctccaaccacataggtgaagttttccagggtgttataaccggtctcgcaaaattc
ggaatcttcgtggaaataaccgaaaagatgatatcaggcctggtgcacatatccactttg
gacgactattacgacttcatagaaaaccagaacatactggtcggcagaaagaacaagagg
atcttcaggattggcgacgatcttaaagttcaggcggtcagggctgataaaacgactatg
gagatagacttcagcatagtggaaaaagagaaaaagcctgtcaaaaaagtcagtcacgaa
cagaaaaaccgttcaaaaaagccgaagaaacaccacaaatga
DBGET
integrated database retrieval system
