Microbacterium sp. PAMC 28756: AXH82_13950
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Entry
AXH82_13950 CDS
T04312
Name
(GenBank) topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mip
Microbacterium sp. PAMC 28756
Brite
KEGG Orthology (KO) [BR:
mip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mip03032
]
AXH82_13950
03400 DNA repair and recombination proteins [BR:
mip03400
]
AXH82_13950
Enzymes [BR:
mip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AXH82_13950
DNA replication proteins [BR:
mip03032
]
Prokaryotic type
DNA Topoisomerases
AXH82_13950
DNA repair and recombination proteins [BR:
mip03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AXH82_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMG84378
LinkDB
All DBs
Position
2938558..2939568
Genome browser
AA seq
336 aa
AA seq
DB search
MARLVRVVPGQDPGFTRKRTSSGFRYVDPTGEPAPEADRERISDLVIPPAWQDVWIAADP
LAHIQAVGIDTAGRKQYLYHPLWRVSRDRRKFVRALDLAAALPSARAQVTKALKEDGQTK
ERALAIAFRLLDDAALRIGSERYLARHGSRGLTTLRRRDVRIDGGDVALSFPAKSGQTAA
IEITDEALAEALTDFASGASTAFLLAYRKGRRRVKITPAEVNTYLKDVLGASFSAKDFRT
LHGTIIAADALARIGALDRRGQRNQAERLAVQAAATALGNTTAVARNSYIDPRVFRQYGR
GRTLDLDVTPETAIRRLLGGPETSRKVNRRGTGRRG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgactggtgcgagtggtgcccggccaggacccgggtttcacacggaagcggacg
agctcgggattccggtacgtcgatccgacgggggagccggcgcccgaggcggatcgcgaa
cgcatcagcgacctggtgatcccgccggcgtggcaggacgtgtggatcgcggccgacccg
ctcgcgcacatccaggccgtcgggatcgacaccgccgggcgcaagcagtacctgtatcac
ccgctctggcgggtctcccgcgaccgtcgcaagttcgtccgtgcgctggacctcgccgca
gctctgcccagcgctcgggcgcaggtcaccaaggcgctcaaggaggacgggcagacgaag
gagcgcgccctcgcgatcgccttccgcctcctcgacgacgccgcgctgcggatcggttcg
gaacgctacctggcgcgtcacggcagccggggcctgaccacgctccgccgccgcgacgtc
cgtatcgatggcggcgacgtcgccctctctttcccggcgaagagcggacagaccgccgcg
atcgagatcaccgacgaagccctcgccgaagccctgaccgacttcgcgagcggtgcctcg
accgctttcctcctggcgtaccggaagggtcggcggcgggtgaagatcacgcccgccgag
gtcaacacgtacctcaaggacgtgctcggggccagcttctcggcaaaggacttccggacg
ctgcacggcacgatcatcgccgcggacgccctcgcccgcatcggagccctcgaccgccgc
ggtcagcggaaccaggccgaacgtctcgcggtgcaggcggcggcgaccgccctcggcaac
acgaccgcggtcgcccgcaacagctacatcgatccccgtgtgttccggcagtacggtcgg
gggcggacgctcgacctcgacgtgacgcccgagacggcgatccggcgactgctgggcgga
ccggagacgtcgcggaaggtcaaccggcgaggaacggggcggcgcggttga
DBGET
integrated database retrieval system
