Microcystis sp. MC19: B5D77_21805
Help
Entry
B5D77_21805 CDS
T05365
Name
(GenBank) DNA-directed RNA polymerase subunit beta''
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
miq
Microcystis sp. MC19
Pathway
miq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
miq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B5D77_21805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
miq03021
]
B5D77_21805
03400 DNA repair and recombination proteins [BR:
miq03400
]
B5D77_21805
Enzymes [BR:
miq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B5D77_21805
Transcription machinery [BR:
miq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B5D77_21805
DNA repair and recombination proteins [BR:
miq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B5D77_21805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Biotin_lipoyl
RnfC_N
RPOC_hybrid
DUF5694
Motif
Other DBs
NCBI-ProteinID:
AVQ74416
UniProt:
A0A2P1UNB8
LinkDB
All DBs
Position
complement(4334773..4338780)
Genome browser
AA seq
1335 aa
AA seq
DB search
MFYNQTVDKGKLKKLIAWAYQNYGSARCSQMADELKNLGFRFATKAGVSISVDDLTVPPA
KRQMIESAEQEIRQTEQRYVRGEITEVERFQKVIDTWNSTSESLKDEVIRNFQVTDPLNS
VYMMAFSGARGNMSQVRQLVGMRGLMANPQGEIIDLPIKTNFREGLTVTEYVISSYGARK
GLVDTALRTADSGYLTRRLVDVSQDVIVREADCGTNRYIELTAMTDGDRVLIPLSDRLLG
RSLAEDVVVKGEVIATRNQIIDDETAEKLGKLVDKIKVRSPLTCEAARSVCQTCYGWSLA
HGHPVDMGEAVGIIAAQSIGEPGTQLTMRTFHTGGVFTGEVARQVRSPFEGTVRFLPGLS
IRNVRTRHGDERDQVEAPGEIKLTPRDKTKETVTYSLTPGSLLFVTDGATVSEEQLLAEI
TSDKVQKSTEKATKDVTSDLAGEVLFSQLVPEEKTDRQGNTTRIAQRGGLLWILSGEVYN
LPPGAEPVVSNGDQVQVGDVLAETKLVSTNGGLVRLAPNSREIDIVTASVSLDQAEVKVE
SSAGREQFIIHTGDGQRFLLKTTPGTKVQNHAIVAELIDDRYQTHTGGMIKYVDIEVSKG
SRKQGYEITKGGTILWIPEETHEVNKDISLLQVEDGQYVEAGEEVVKDIFCNSSGVVEVI
QKNDILREIIVKPGLLFMDLEPESSGIAQEQLIYPGTQLTPEVTIEELRQAEWVETNEGL
GLLLRPVQEFTVDDQSTSPTQGSANQEGGRHIELRSVQRIFFKDGERVKSVEGCQLISTQ
LVLEISSEEPESVSHLTADIELEPIEDSDCQRLQLVILESLVLRRDSDGDPLGGNIQTRV
LVQDGDEIPPGAVVARTEIQCKETGEIRGIRKGSEAVRRLLIVRTSDEFILPISVAATVK
AGDLVIAETEIGAGVLAPNSGQVLAVDKTATGYDIRLRSARPYRVSAGAILHIDEGDLVQ
RGDNLVLLVFERSKTGDIIQGLPRIEELLEARKPKEACVLARKPGVCQVEYQDSEIVDIK
VVEDDGTISEYPLLGSQNPLVSDNQRIDVGQALTDGQANPHEILEVFFNYYVDSLGSYEA
ALKALEKTQMFLVDQVQSVYQSQGIDIADKHIEVIVRQMTSKVRIDDGGDTSMLPGELLE
LRQVETVNEAMSITGGAAAKYTPVLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKS
DWLRGLKENVIIGRLIPAGTGFNAHENTAGIGDYPPPEEEYNYNNRSYYAAPGGIGLPPR
PGFGDSSDDSDMILDDQTARAYAEGDVVDLEDDEMAFLSSRGSSRFSRPPISDRWSAADE
EGEEDDFEEDYEEEE
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgttttataaccaaactgttgacaaaggaaaactaaaaaaactgatcgcttgggcctat
caaaactacggttcggcgcgctgttcacaaatggccgatgaattgaaaaacctcggtttt
cgtttcgctaccaaagcaggggtttccattagtgtggatgatttaaccgtaccgccggct
aaacgacagatgatcgaaagtgccgaacaggaaatccggcaaaccgaacagcgttatgtg
cgcggggaaatcaccgaagtggaacgcttccaaaaagtaattgacacttggaatagtaca
tctgaatcgcttaaagatgaagtaattcgcaacttccaagttaccgatcccctcaactcc
gtctatatgatggctttctccggagcgcggggtaatatgagccaagtacgtcagttagtg
ggaatgcgggggttaatggctaatccccagggggaaattatcgacctcccgattaagact
aacttccgggaaggattgaccgttaccgaatacgttatttcctcctacggggcgcgcaaa
ggtttagttgatacagccctacggacggcagattccggttatttgactcgtcgtctcgtc
gatgtgtcccaagatgtcatcgtccgcgaggccgattgtggcaccaatcgttacatcgaa
ttaaccgccatgaccgatggcgatcgcgtgttaattcccttaagcgatcgcctattaggg
cgctccctggccgaagatgtggtggtcaagggagaagtgatcgccacccgtaaccagatt
atcgatgacgaaacggcggaaaaactgggcaaactggtcgataaaatcaaggtccgcagc
cccttaacctgtgaagcagcccgctcggtttgccaaacctgttacggttggagtctcgcc
cacggtcatccagtggatatgggggaagcagtgggaattattgccgcccaatcgatcggg
gaaccggggactcagttaaccatgcggaccttccacaccgggggcgtatttaccggagaa
gtagcccggcaagtgcggagtcccttcgagggaactgtgcgttttctgccggggttaagt
atccgtaacgtgcgaacccgccacggagatgaacgggatcaagtggaggccccaggggaa
attaaattaacacccagggataaaactaaagaaactgtcacctactctttgactcctggt
tcactgctattcgtcaccgatggggcaacagtaagcgaggaacagttactagcggaaatt
acctccgataaagtccaaaaatcgacagaaaaagccacaaaagacgtaaccagtgactta
gctggtgaggtgctattctcccaattagtgccagaagaaaaaactgatcgccaaggcaac
accacccgcatcgcccaacgggggggattactatggattctctccggagaagtgtataac
ttgcccccaggggccgaacccgtggtcagtaacggcgatcaagtacaagtgggggatgtt
ctggcggaaactaagttggtatccactaacggcggtttggtgcgtttagcccccaatagc
cgggaaatcgatatcgtcaccgcttccgtgtctttggatcaggccgaagtaaaggtagaa
agtagtgccggtcgggaacaatttattattcataccggagatggtcaacgcttcctgctg
aaaaccactccggggacaaaagtacagaatcatgccattgtcgccgagttaatcgatgat
cgctatcaaacccacaccggcggcatgattaaatacgtcgatatcgaagtctccaaaggc
agccgcaaacagggttatgaaatcaccaaaggcggcacgatcctctggattcccgaagaa
actcacgaagttaataaagatatctccctcttacaggtggaagatgggcagtatgtggaa
gcaggggaagaagtggttaaagacatcttctgtaactctagcggtgtggtggaagtgatc
cagaaaaatgacatcctccgggagattattgtcaaaccggggctgttatttatggatctc
gaaccggaatcctccggaattgcccaagaacagttaatttaccctggaacacagttgact
cccgaagtcacgatcgaagagttacggcaagcggaatgggtggaaactaacgagggtttg
gggctactactgcgaccagtacaggagttcaccgtcgatgaccaatccacttctccgacc
caagggtccgctaaccaagaagggggacggcatatcgaattgcgatcggtgcagcgcatc
ttctttaaagacggggaaagagttaaatccgtcgagggttgtcaactgatcagcacccaa
ttagtcctagaaatttctagcgaagaaccagaatcggtctcccatctgacggctgatatc
gagctagaaccgattgaggacagcgattgtcagcgtttacagttagttattctggaatct
ctggtgctgcgtcgggatagcgatggtgatcctttagggggtaatattcagactcgcgtt
ctcgtccaagatggcgatgaaattccaccgggggcagtggtagcccgcaccgagatccag
tgtaaggaaactggagaaattcgcgggattcgcaaggggagcgaagcggtgcgccgtctt
ttaatcgtgcgtaccagtgacgagtttattctcccgatctctgttgctgccaccgtcaag
gccggggatctggtaatcgccgaaaccgagatcggtgccggagttttagcccccaattcc
ggtcaagtgttggccgttgacaaaaccgccactggctatgatatccgtctgcgtagcgcc
cgaccctaccgagtatcggcgggggccattctgcacatcgatgagggggatttagtccaa
cggggcgataatttggtgctgttggtgtttgagcgctcgaaaactggggatatcattcaa
ggtttacccagaatcgaagaactgctcgaagcacgcaaaccgaaagaggcttgtgtccta
gcacgcaaaccgggagtttgtcaagtggagtaccaagattctgagattgtcgatattaag
gtggtcgaagatgacggcacgatcagtgaatatccgcttttaggcagtcaaaatcctctg
gtgagcgataatcagcgtatcgatgtgggtcaggcgttaaccgatggtcaggctaatccc
cacgagattttagaggtgttctttaattattatgtggatagcctgggcagttacgaagca
gccctgaaggccttagaaaaaacccagatgttcctcgttgatcaggtacagtcggtctat
caatcccagggaatcgatattgccgataaacacatcgaagtgatcgtgcgtcagatgacc
tctaaggtgcggatcgatgacggcggcgataccagtatgttacccggggaattgttggaa
ctgcgacaggtggagacggtcaacgaagccatgtcgatcaccggcggggcggcggctaaa
tatacgcctgtactactgggaatcaccaaggcctccttgaataccgatagctttatcagt
gccgcctccttccaagaaaccacccgcgttctcaccgaagcggcgatcgaaggcaagtcc
gactggttacgcggtctcaaggaaaacgtgattatcggtcgtctgattccggcaggtact
ggcttcaatgcccacgaaaacacggcggggatcggcgattacccccccccagaggaggaa
tataactacaacaatcgtagctattacgctgcccccggcgggatcggactccccccccgt
cccggtttcggcgatagtagtgacgatagcgatatgattcttgacgatcaaaccgctcgc
gcctacgctgagggtgatgtggtcgatttagaggatgatgaaatggctttcctctcctcc
cgcggcagcagtcgctttagtcgcccacctatcagcgatcgctggtcagcagctgatgag
gaaggagaggaggacgatttcgaggaggattacgaagaagaagaataa
DBGET
integrated database retrieval system
