Micromonas commoda: MICPUN_102772
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Entry
MICPUN_102772 CDS
T02695
Name
(RefSeq) predicted protein
KO
K16478
nephrocystin-4
Organism
mis
Micromonas commoda
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mis03037
]
MICPUN_102772
Cilium and associated proteins [BR:
mis03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
MICPUN_102772
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
Motif
Other DBs
NCBI-GeneID:
8247099
NCBI-ProteinID:
XP_002508539
JGI:
MicpuN3_102772
UniProt:
C1FHC9
LinkDB
All DBs
Position
10:join(814190..814234,814418..817680,817877..817907)
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AA seq
1112 aa
AA seq
DB search
MASEPEPPTGLDAVPASSAAAAEAEESRIAPAASDPPAPVPPAPVATAETTATEPSTEPS
TRTATGPAPEPAAPADPSTYRGVEGTDFRVAATETLVQAQSKERIAELAGVDPNAATREA
DSIVAAAKAKADAEAAAAAAKAAAEKEEEDAALKIQAVFRGKAARRDVEEFKKGGGVESR
SATTEAAAGGGVGAFAAGSNALHVEDTASKAVQPAPPAMQLGHWETFAARQIARHVPVAS
GGLALGPAPRGYRFRVLAVEAFPFGPECFRIRDRGNTLEAKVNVSFYDECTGSFHGATCS
SAPEPAEIPATPGDGDGDAAPVATLDVQHDAYFTTRVCDPRCLIVVEIVLVERRGDGSAA
RETSAGWAAMPAVGPGGAEPTGAPGSAPVRQGSPRYLMWGRPRAGQHPPSQLGRAKLHFV
HETCPALLRAAPLIPEDFPVTYGDVVPGVLRFDADGELTSDVDAVTTTLTSPLLAPTRAV
SLSGMRVNLPKRMMDVVAASPDLAVALHGAGAKPPGVDSLVANPTASAAAIAAAKCVTVR
ITAHNGRVFVGESVEASDFAVDPEGSPSCIVLRSDAIVPDVPQDVLVVLVVEVLYRAPGK
RGEPPVTLGWAATCPFRPGIESPGHATSDTFSGSLALRIGEDALLVTRRGRGPRAEPCVD
WRSVVQAPQEVWRAVFRSGGDVSDKDETSVAFTFAAAEGDTGGHRGASQAEAARALLDAP
VADNVAQAKSKMAQAETALKDTSMTGRERAKAEAALAAAKMDLSSQQQLVQVMERMQVQL
NELASSVNVIKTDLRGSRDAAPAPPAAERARPLDRSPRVSPEVRNAEPVPRVPEASHSTD
PEPRVPEASHSPPMDEPVYADEEWPAAGPAEGSSALFSGAAADAGEPLVSARGLGGFSRA
TRARLHAAGADATLPPDVRDAIRAAASRAGAPQNPTLDIVREHRDIRAVNEVIVQFLAYR
KFDALNSTSQLADVHFTFNFFDFPASTSRPCVLTPPDVPRGEPQMLVPKGAPRRSDGGER
AGDAWFRFKVDGTGNGTGDKIPDGPDAMHARRCAFVDYCATQRLSVDVWDGSSLMQHGTC
SIDLTGLLRQGRDSAEVMVEAPVAATAPRVTS
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgagccagaaccgccaacagggctcgatgcggtcccggcctcatcagcggct
gcggcggaagcggaggagagccgcatcgcgccggcagcgagcgaccctcccgcgcccgtc
cctcccgcgcccgtcgcgacggcagagacgaccgcgaccgagccatcgaccgagccatcg
acgcgcaccgcgaccggacccgcgccggagccggcggcccccgcggacccgtcgacctat
cgcggcgtggagggcaccgacttccgcgtcgccgccaccgaaaccctcgtccaggcgcag
agcaaggagcgcatcgcggagctcgcgggcgtcgacccgaacgcggcgacgagggaagcc
gactcgatcgtcgccgcggcaaaggccaaggccgacgccgaggccgccgcagccgcagcc
aaggcggcggcggagaaagaggaggaggacgccgcactgaagatccaggcggtgttccgc
ggtaaggctgctaggcgcgacgtcgaggagttcaagaagggcggcggcgtcgagtcgaga
tcggcgacgacggaggcggcggcgggcggcggcgtcggcgccttcgcggcgggttccaac
gcccttcacgtcgaggacaccgcgtccaaggctgtgcagcccgcgccccccgcgatgcag
ctcgggcactgggaaacgttcgccgcgaggcaaatcgctcgccacgtcccggttgcttcg
ggcgggttggcgctgggtcccgcgccgcgggggtatcggttcagggtcctcgcggtcgag
gcgttcccgttcggccccgagtgcttccgcatccgcgaccgagggaacacgttggaggcc
aaggtgaacgtgtcgttctacgacgagtgcacgggctcgtttcacggcgcgacgtgctcg
tcggcgcccgagcccgccgagatcccggcgactcccggcgacggcgacggcgacgccgcg
cccgtggcgacgctcgacgtccagcacgacgcgtactttaccacccgcgtgtgcgacccg
aggtgcctgatcgtcgtggagatcgtgctcgtggagcggcgcggggacggttcggcggcg
cgggagacgtccgcggggtgggcggctatgcccgccgtcggccccggcggcgccgagccg
acgggggcgccgggcagcgcgcccgtgcgccagggatcgccgcggtacctgatgtggggc
agaccccgcgcgggccagcacccgccgagccagttgggcagggcgaagctccactttgtc
cacgagacgtgccccgcgcttctcagggcggcgccgctcatcccggaggatttccccgtc
acctacggcgacgtggtgcccggagtgcttcgattcgacgcggacggcgagctaaccagc
gatgtcgatgccgtgaccaccacgctcacgtcgccgctgctcgcgcccacgagggcggtg
tcgctgtcggggatgagggtgaatcttccgaagcggatgatggacgtggtcgccgcgtcg
cccgatctcgccgtcgcgctccacggcgcgggtgccaagcccccgggcgtggactccctg
gtggcgaaccccaccgcgtcggccgcggcgatcgcggcggccaagtgcgtcaccgtgcgg
atcaccgcgcacaacggcagggtctttgtgggcgaatccgtcgaggcgtctgatttcgcc
gtcgaccccgagggttcaccgagctgcatcgtcctgagaagcgacgcgatcgtcccggac
gttccccaggacgtcctcgtggtcctcgtggtcgaggtgttgtaccgcgctccggggaag
cggggcgagccgccggtgacgctgggatgggcggcgacgtgtccgttccgaccggggatc
gaatcgcccggacacgcgacgtcggacaccttctccggaagcctcgcgctgcgaatcggc
gaggacgcgctcctcgtgacgcgtaggggccggggtccgcgcgcagagccgtgcgtggat
tggcggtcggtcgtgcaggcgccgcaggaggtttggcgcgcggtgtttcgaagcggcggg
gatgtcagtgacaaggatgaaacgtcagtcgcgtttacgtttgccgccgcggagggagac
acgggcggccatcgcggcgcgtcccaggccgaggctgcccgcgcgttgctcgacgccccc
gtcgcggataacgtcgcgcaggcgaagagcaagatggcgcaggctgagacggcgctcaag
gacacttccatgactggtcgggaacgggccaaggctgaggcggcgctcgcagctgcgaag
atggacctgtcctcgcagcagcagctggtgcaggtgatggagcggatgcaggttcagctg
aacgagctggcgagctcggtcaacgtcatcaagaccgacctgcgtggctcgagggacgcc
gcgccggcgccgcccgcggctgaacgcgcgcgacccctcgaccggtccccccgcgtgtcc
ccagaggttaggaacgcggaacccgtgcctcgcgtccccgaggcgtcccactccacggac
cccgagcctcgcgtccccgaggcatcccactcgcccccaatggacgagcccgtctatgcc
gacgaagagtggcccgccgcgggtcccgccgaggggtcctccgcgctcttcagcggcgcc
gccgcggacgccggcgagccgctcgtgtcggcgcgaggcctcggcggcttcagccgggcc
acccgcgcgaggctccacgcggctggcgcggacgcgacgctcccgccggacgtccgcgac
gctattcgggccgcagcttcgcgcgccggcgcgccgcagaacccgacgctggacatcgtc
cgcgagcacagggatattcgagcggtgaacgaggtcatcgttcagtttttggcctaccgc
aagttcgacgcgctcaactctacctcgcagctcgcggacgtgcacttcacgttcaacttc
ttcgacttccccgcgtccacttccaggccgtgtgtgctgacgccccccgacgttccccgc
ggtgagccgcagatgctggtacccaagggtgctccgaggaggtccgacggcggcgaacga
gccggcgacgcgtggtttaggttcaaggttgacgggaccggtaacggcaccggggataag
atcccggacggtccggacgcgatgcacgcgcgacgatgcgcgtttgtcgactactgcgcg
acgcagcggctcagcgtggacgtctgggacggtagctcgctgatgcagcacgggacgtgc
tcgatcgacctcaccggtttgctcaggcaggggcgggattcggcggaggtgatggtggag
gcgccggtggcggcgacggcgccgcgggtaacgtcgtga
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