Micromonas commoda: MICPUN_60649
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Entry
MICPUN_60649 CDS
T02695
Name
(RefSeq) predicted protein
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mis
Micromonas commoda
Pathway
mis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MICPUN_60649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mis03032
]
MICPUN_60649
03400 DNA repair and recombination proteins [BR:
mis03400
]
MICPUN_60649
DNA replication proteins [BR:
mis03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
MICPUN_60649
DNA repair and recombination proteins [BR:
mis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
MICPUN_60649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
8245816
NCBI-ProteinID:
XP_002507894
JGI:
MicpuN3_60649
UniProt:
C1FFW2
LinkDB
All DBs
Position
8:join(490091..490135,490299..493166)
Genome browser
AA seq
970 aa
AA seq
DB search
MSAIIITTGFDANDKREIKALIDKLGATFGDPDFTATSPFDYCVTKTTNSPKYDLAVKLF
KPVVTFAWLRDSAEAGELLPVEEVGHIPKAFLGLCVCVTGYTQDERTELEALVTKNGGLY
MSDLVKGKCTHLVASGTTSGKYTHAKKWDGIKIVSREWVTESATGGVKANEARFPVEGTP
EAAAAASRANIDADEAADAAVAWDSCYLMGCTVYLHELGNPKESAEWARAMQAVRHGSAF
TTSNASKATHVVVSVSAAAGSLRDIRDQRDKTVLSTWLDASKALGAPAPVEEHAAPSALF
ATRREPPAKKGGGINRVDSMILSQEAASTHDKGKTSKATASKATEAADRRRRRRSGPASP
NPLTRQALAAEAAKAAAAEEDAAANRVDLADQNMPPRYHQPLSPAAARVTAATTDPGCSF
DPGTATDLPATAVAIQETNGLGVDGDDYSTVFKGMRITLSPLLSREEEEAASEIVTRGSG
IVTKKKAASSAYIVCPAAPTREERAILNSAPESERRRHVTCHWLEISCELGYVVPLDSNR
GGNPACRPLPCDAPFDSMHGLRISTSLYDEDVKSSVNMLCHLLGAKYTERLGRNKNTHLV
VPYAEGKKYEAAVGWGLHAVTVEWLHACIEAGRKVEERDFKPPPPPSDDDRNGDDGRAGA
FTTDGGDTQEAPPPPVATNAKGSDRRRSAGIDIGGGNVCGGSQRGALNLVGSAVQRDTSR
AAQTSQRAPPSTRRSTRPVSKTPAQPKPKAGARSTPRRGESIAAPTTAAPAPATGVKRHL
GSDRSPVSVGVDLEPEPPAPPPPRVTTGGRAAHPADGSQMVANLIDDVAAGMFDGGESQL
DDGFDGFRVPDPVQTEAAVAAVRDGMTSPGGAGRGKRRRGPGDTTPSGMVGGIGGGVGES
QMMESQQMMESQQMVGYADDGPPRGRSHTFGGGRGGASGLVNSLLGAAGRGAGSATPSAT
ASGLQAEDWV
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgataatcatcacgacgggtttcgatgcgaacgacaagcgcgagatcaaggcg
ctcatcgacaagcttggcgcgaccttcggagatccggacttcaccgcgacgagcccgttc
gactactgcgtcacgaagaccaccaactcgccgaaatacgatctcgcggtgaagctgttc
aagcccgtggtcacctttgcatggcttcgtgacagcgccgaggccggcgagctcctgcct
gtggaggaagtcggccacatacccaaggctttcctcggactgtgcgtgtgtgtcacggga
tatacacaagatgagcgcaccgagctcgaggcgctggtgaccaagaacgggggcctgtac
atgtccgacctggtcaagggcaagtgcacgcatctggtggcgtccggtacgacgagcggg
aagtacacgcacgcgaaaaagtgggacggcatcaagattgtgagcagggagtgggtgaca
gagagcgcgacggggggcgtgaaggcgaacgaggcgcgtttcccggttgaggggaccccg
gaggcggctgctgccgcgtcgagggcgaacatcgacgcggacgaggctgcggacgcggcg
gtggcgtgggactcgtgttacttgatggggtgcacggtgtacctgcacgagctgggcaac
ccgaaggaatcggcggagtgggctcgggccatgcaagcagtgcgacacggctcggcgttt
accacttccaacgcgagcaaggcgacgcacgtggtcgtcagcgtcagcgcggcggcggga
agcctcagggacatacgcgatcaacgggataagacggtgctcagcacctggctggacgcg
tccaaggcgctgggggcgccggcgccggttgaggaacacgccgcgccgtcggctctgttt
gcgacgcggcgggagccaccggcgaaaaaaggtggcgggataaaccgggtggatagcatg
atcctcagccaggaggcggcgtcgacgcacgacaaggggaaaacgagcaaggcgaccgcg
tcgaaggcgacggaagcggcggacagacggcggcgcaggcgaagcggaccggcgtcgccc
aacccgctgacgcgccaagcgctcgccgcggaggctgcgaaagcggcggcggcggaggaa
gacgccgccgcgaacagagtcgacctcgccgatcagaacatgccgcctcggtatcatcag
ccactgtctcccgcggcggccagggtgacggccgcgacgaccgatccgggctgctcgttc
gacccggggacggcgacggatcttcccgcgacggcagtcgccatccaggagaccaacgga
ctcggggttgacggggatgactactccaccgtgttcaagggtatgcgcatcacgttgagt
ccgctgctgagcagggaagaggaggaagccgcgagcgaaatcgtgaccaggggctcggga
atcgtgacgaagaagaaggcggcgtcgtccgcgtacattgtctgtccagctgctccgacc
agggaggaacgagccatcttgaactctgcgcccgaatccgagaggaggcggcacgtcacc
tgccactggctggagatatcctgcgagctcggatatgtcgttcctctcgacagtaaccgc
ggcggcaaccccgcctgtcgaccgctgccctgcgacgcgccgttcgactccatgcatgga
ctcaggatcagcacctccctctatgacgaggacgtcaagtcgtcggtgaacatgctgtgc
cacctgctgggcgcaaagtacacagagaggcttggcaggaacaagaacacccacctcgtg
gtcccctacgcagagggaaagaagtacgaggcggcagtcggatggggactgcacgccgtg
accgtggagtggctccacgcgtgcatcgaggcgggacgcaaggttgaagagcgagatttc
aagcccccgccgccgccgtcggatgacgatcgaaacggggacgacggtcgggcgggggcg
ttcacgacggatggcggcgacacgcaagaggcaccgccaccaccggttgccacgaacgct
aaggggtccgatcgccgtcgctccgcgggtatcgacattgggggaggaaacgtgtgcggt
gggtcgcagcgcggcgctctcaacctcgtcgggagtgcggtccaacgcgacacctcgcgc
gcggcgcaaacatctcagcgcgctcccccgtcgacgaggaggtccacgcggcccgtgtcc
aagacgccggcgcagcccaagccaaaggctggcgcgaggtccacgccgaggcggggcgag
tccatcgccgcgccgacgaccgccgctccggcacccgcgacgggcgtgaaacggcacctc
ggttccgatcgaagcccggtttccgtcggcgtcgacttggagccggagcctcccgcgcct
ccgcccccacgggtgaccaccggcggcagggccgcgcacccggcggacgggagtcagatg
gtggccaacctcatcgacgacgtcgccgcgggtatgttcgacgggggcgagtcgcaactg
gacgacggctttgacggatttcgggttcccgatccggtgcagacggaggcggcggtcgcc
gcggtgcgagacggcatgacctcacccggaggcgccggtcgtggaaagcgtcgaaggggt
cccggggatacgacgccgagcgggatggtcgggggaatcggcggcggcgtgggggagtcg
cagatgatggaatcgcagcagatgatggagtcgcagcagatggttgggtacgccgacgac
ggtcctccccgcggccgctcgcatacattcggcgggggtcggggcggggcgagcggattg
gtgaactccctcctcggtgccgcgggtagaggcgcggggagcgcaactccaagtgcgacg
gcttcaggcttacaggcggaagactgggtgtga
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