Microvirga sp. 17 mud 1-3: C4E04_19405
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Entry
C4E04_19405 CDS
T05470
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03030
DNA replication
miv03410
Base excision repair
miv03420
Nucleotide excision repair
miv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C4E04_19405
03410 Base excision repair
C4E04_19405
03420 Nucleotide excision repair
C4E04_19405
03440 Homologous recombination
C4E04_19405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
miv03032
]
C4E04_19405
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_19405
Enzymes [BR:
miv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C4E04_19405
DNA replication proteins [BR:
miv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
C4E04_19405
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
C4E04_19405
NER (nucleotide excision repair)
GGR (global genome repair) factors
C4E04_19405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
Taq-exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AWM88683
UniProt:
A0A2Z3ID30
LinkDB
All DBs
Position
4125987..4129028
Genome browser
AA seq
1013 aa
AA seq
DB search
MTSSRPVTAGDHVFLVDGSSFIFRAYFQSMNQDSKYNSRTSDGMPTGAVRLFVSKLLQFV
RDGAAGFMPTHLAIVLDKSEGSFRKELYEAYKGHRPDAPEDLKVQMPLMREAIRAFGLEP
IEQARYEADDLIATYTQEAKARGANVLIVSSDKDLMQLVGPLVCFYDFESGSKGKPGYRP
ERNLDEAAVTEKWEGIPPEKIGDVLALMGDTSDNVPGVPGIGLKTAAQLIKEYGDLETLL
ARADEIKQPKRRETLINNAEAARLSKKLVTLDCEAPLPVSLDALRLPEPDPKTLVGFLKA
MEFSTLTRRVADLYDVDPTQVEPDPRLMPGGEAITWQRFGGPAPVEEDVPFSGGAGTTEV
DPFAGLDLPETGRARKPMEGLGTPSQLAGKRATEAASQPVDVQAYETITSLERLTEWVEE
ARGQGFVAVDTETSALDANQADLVGFSLALAPGRAAYVPLQHRGDSDLFGGGLVPGQIPV
EAALAAIRPLLQDPSVLKIGQNLKYDWVVFKRYGIDLGPFDDTMLISYVLDAGKGSHGMD
ELSRRHLGHSPITFSEVAGTGRNKVSFDRVDIARATAYAAEDADVTLRLWQVLKPRLAAE
HRTTVYETLERPLIDVIARMEMRGIAVDRQILSRLSGDFAQSLARLEDEIHEIAGEKFAL
GSPKQIGDILFGKMGLPGAKKTPSGQWATPATLLDELAQAGHVLPEKILEWRQLAKLKST
YTDTLQEHMHPETRRVHTSFSLASTTTGRLSSSEPNLQNIPIRTEAGRKIRKAFVAPEGS
KIISADYSQIELRILAHIADIPQLQEAFAKGQDIHAATASAMFGVPLDQMTPDLRRQAKT
INFGIIYGISAFGLAVRLGIPNADAAAFIKQYFERFPGIRAYMDEIKKTTREKGYVTTLF
GRVCHYPQIKSGNPSERAAVERQAINAPIQGTAADIIRRAMIRMEDALKAERLSARMLLQ
VHDELVFEAPDEEIEATLPVISRVMTEAPFPAVTLKVPLAVEARAAQNWDEAH
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcacgtcccgtcaccgccggcgaccatgtcttcctcgtcgacggttcgtcc
ttcatcttccgggcatacttccagtccatgaaccaggactcgaagtacaacagccgcacc
tcggatggcatgccgacgggtgcggtgcggctcttcgtgtcgaagctcctacaattcgtg
cgcgacggcgcggccggcttcatgccgacccatctcgccatcgtgctcgacaaatccgag
ggctcgttccgcaaggagctctacgaggcctataagggccaccggccggacgcgcccgaa
gacctgaaggtgcagatgccgctcatgcgggaggcgatccgcgccttcggcctggagccc
atcgagcaggcccgctacgaggcggacgacctcatcgcgacctatacgcaggaggccaag
gcccgcggcgccaacgtgctgatcgtctcgtccgacaaggacctgatgcagctcgtcggg
cctctcgtgtgcttctacgatttcgaatcgggctccaagggcaagcccggctaccgcccc
gagcgcaacctcgacgaagccgccgtgaccgagaaatgggagggcatcccgcctgagaag
atcggcgacgtgctggccctcatgggcgatacctccgacaacgtgccgggcgttcccggc
atcggcctcaagaccgccgcccagctcatcaaggaatacggcgacctggagaccctcctg
gcgcgtgcggacgagatcaagcagcccaagcgccgcgagactctcatcaacaatgccgag
gcggcgcggctctcgaagaagctcgtcaccctcgattgcgaggccccgctcccggtctcc
ctcgatgccctgcgcctgccggagccggacccgaagaccctggtcggcttcctcaaggcc
atggagttcagcaccctgacccggcgggtggccgatctctacgacgtggatccgacccag
gtcgagccggacccgcgcctgatgccgggcggcgaggccattacctggcagcgcttcggc
ggccccgcccccgtggaggaggacgtgccgttctcgggcggtgcaggcaccacggaggtc
gatcccttcgcggggctcgaccttccggaaacgggccgcgcgcgcaagcccatggaaggc
ctcgggaccccctcccagctcgccggcaagcgggccacggaggcggcttcccagcccgtg
gacgtgcaggcctacgagaccatcacgagcctcgagcgcctgaccgaatgggtcgaggag
gcgcgcgggcagggtttcgtcgccgtggacacggagacgagcgcgctggacgccaaccaa
gccgatctcgtgggtttctcgctggcgctcgcgcccggcagggccgcctatgtgccgctc
caacatcgcggcgactcggacctgttcggcggcggcctggtgccgggacagatccccgtc
gaggcggcgcttgcggccatccggccgctcctgcaggatccgtccgttctcaagatcggc
cagaacctgaaatacgactgggtcgtcttcaagcggtacggcatcgacctcggccccttc
gacgacaccatgctgatctcctacgtgctcgacgcgggcaagggctcgcacggcatggac
gagctctcgcgccgccatctcgggcactcgcccatcaccttttcggaggtggccggaacg
ggccgcaacaaggtgagtttcgacagggtcgacatcgccagggccacggcctatgcggcc
gaggacgcggacgtgaccttgcgcctgtggcaggtgctcaagccgcggctcgccgccgag
caccgcaccaccgtctacgagaccctggaacggcccctcatcgacgtgatcgcccgcatg
gagatgcgtggcattgcagtggaccgccagatcctcagccgcctctcgggcgacttcgcc
cagagcctcgcgcggctggaggacgagatccacgagatcgcgggcgagaagttcgccctc
ggctctccgaagcagatcggcgacatcctgttcggcaagatgggcctgccgggcgccaag
aagacgccctccggccagtgggcgacccctgcgacccttctggacgaactggcgcaggcc
ggccacgtgctgcccgaaaagatcctcgaatggcgccagctcgccaagctgaaatccacc
tatacggacaccctgcaggagcatatgcatcccgagacgcggcgggtgcacacctccttc
tccctcgcctccaccaccacggggcgcctctcctcctccgagccgaacctgcagaacatc
ccgatccgcacggaagccggccgcaagatccgcaaggccttcgtggcgccggaaggctcc
aagatcatctcggccgattacagccagatcgagctgcgcatcctggcgcatatcgccgac
attccgcagttgcaggaggccttcgccaagggccaggacattcacgcggccaccgcctcg
gccatgttcggcgtgccgctcgaccagatgacgcctgacctgcgccggcaggccaagacc
atcaatttcggcatcatctacggcatttcggccttcggccttgcggtgcgcctcggcata
cccaatgcggatgcggccgccttcatcaagcagtatttcgagcgcttcccgggcatccgc
gcctatatggacgagatcaagaagacgacacgcgagaagggctatgtcaccaccctgttc
gggcgcgtgtgccactatccgcagatcaagtccggcaacccgtcggagcgcgccgccgta
gagcgccaggccatcaacgcgccgatccaggggacggccgccgacatcatccgccgggcc
atgatccgcatggaggacgcgctgaaggccgagcgcctctcggcccgcatgctcctacag
gtccatgacgaactggtgttcgaggcgcccgacgaggagatcgaagcgacgctcccggtc
atctcccgggtgatgactgaggcccccttcccggccgtgaccctgaaggtgccgctcgcc
gtggaagcccgcgcggcgcagaactgggacgaggcgcattag
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