KEGG   Microvirga sp. 17 mud 1-3: C4E04_19405
Entry
C4E04_19405       CDS       T05470                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
miv  Microvirga sp. 17 mud 1-3
Pathway
miv03030  DNA replication
miv03410  Base excision repair
miv03420  Nucleotide excision repair
miv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:miv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    C4E04_19405
   03410 Base excision repair
    C4E04_19405
   03420 Nucleotide excision repair
    C4E04_19405
   03440 Homologous recombination
    C4E04_19405
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:miv03032]
    C4E04_19405
   03400 DNA repair and recombination proteins [BR:miv03400]
    C4E04_19405
Enzymes [BR:miv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     C4E04_19405
DNA replication proteins [BR:miv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     C4E04_19405
DNA repair and recombination proteins [BR:miv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     C4E04_19405
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     C4E04_19405
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_pol_A_exo1 Taq-exonuc HHH_5
Other DBs
NCBI-ProteinID: AWM88683
UniProt: A0A2Z3ID30
LinkDB
Position
4125987..4129028
AA seq 1013 aa
MTSSRPVTAGDHVFLVDGSSFIFRAYFQSMNQDSKYNSRTSDGMPTGAVRLFVSKLLQFV
RDGAAGFMPTHLAIVLDKSEGSFRKELYEAYKGHRPDAPEDLKVQMPLMREAIRAFGLEP
IEQARYEADDLIATYTQEAKARGANVLIVSSDKDLMQLVGPLVCFYDFESGSKGKPGYRP
ERNLDEAAVTEKWEGIPPEKIGDVLALMGDTSDNVPGVPGIGLKTAAQLIKEYGDLETLL
ARADEIKQPKRRETLINNAEAARLSKKLVTLDCEAPLPVSLDALRLPEPDPKTLVGFLKA
MEFSTLTRRVADLYDVDPTQVEPDPRLMPGGEAITWQRFGGPAPVEEDVPFSGGAGTTEV
DPFAGLDLPETGRARKPMEGLGTPSQLAGKRATEAASQPVDVQAYETITSLERLTEWVEE
ARGQGFVAVDTETSALDANQADLVGFSLALAPGRAAYVPLQHRGDSDLFGGGLVPGQIPV
EAALAAIRPLLQDPSVLKIGQNLKYDWVVFKRYGIDLGPFDDTMLISYVLDAGKGSHGMD
ELSRRHLGHSPITFSEVAGTGRNKVSFDRVDIARATAYAAEDADVTLRLWQVLKPRLAAE
HRTTVYETLERPLIDVIARMEMRGIAVDRQILSRLSGDFAQSLARLEDEIHEIAGEKFAL
GSPKQIGDILFGKMGLPGAKKTPSGQWATPATLLDELAQAGHVLPEKILEWRQLAKLKST
YTDTLQEHMHPETRRVHTSFSLASTTTGRLSSSEPNLQNIPIRTEAGRKIRKAFVAPEGS
KIISADYSQIELRILAHIADIPQLQEAFAKGQDIHAATASAMFGVPLDQMTPDLRRQAKT
INFGIIYGISAFGLAVRLGIPNADAAAFIKQYFERFPGIRAYMDEIKKTTREKGYVTTLF
GRVCHYPQIKSGNPSERAAVERQAINAPIQGTAADIIRRAMIRMEDALKAERLSARMLLQ
VHDELVFEAPDEEIEATLPVISRVMTEAPFPAVTLKVPLAVEARAAQNWDEAH
NT seq 3042 nt   +upstreamnt  +downstreamnt
atgacttcctcacgtcccgtcaccgccggcgaccatgtcttcctcgtcgacggttcgtcc
ttcatcttccgggcatacttccagtccatgaaccaggactcgaagtacaacagccgcacc
tcggatggcatgccgacgggtgcggtgcggctcttcgtgtcgaagctcctacaattcgtg
cgcgacggcgcggccggcttcatgccgacccatctcgccatcgtgctcgacaaatccgag
ggctcgttccgcaaggagctctacgaggcctataagggccaccggccggacgcgcccgaa
gacctgaaggtgcagatgccgctcatgcgggaggcgatccgcgccttcggcctggagccc
atcgagcaggcccgctacgaggcggacgacctcatcgcgacctatacgcaggaggccaag
gcccgcggcgccaacgtgctgatcgtctcgtccgacaaggacctgatgcagctcgtcggg
cctctcgtgtgcttctacgatttcgaatcgggctccaagggcaagcccggctaccgcccc
gagcgcaacctcgacgaagccgccgtgaccgagaaatgggagggcatcccgcctgagaag
atcggcgacgtgctggccctcatgggcgatacctccgacaacgtgccgggcgttcccggc
atcggcctcaagaccgccgcccagctcatcaaggaatacggcgacctggagaccctcctg
gcgcgtgcggacgagatcaagcagcccaagcgccgcgagactctcatcaacaatgccgag
gcggcgcggctctcgaagaagctcgtcaccctcgattgcgaggccccgctcccggtctcc
ctcgatgccctgcgcctgccggagccggacccgaagaccctggtcggcttcctcaaggcc
atggagttcagcaccctgacccggcgggtggccgatctctacgacgtggatccgacccag
gtcgagccggacccgcgcctgatgccgggcggcgaggccattacctggcagcgcttcggc
ggccccgcccccgtggaggaggacgtgccgttctcgggcggtgcaggcaccacggaggtc
gatcccttcgcggggctcgaccttccggaaacgggccgcgcgcgcaagcccatggaaggc
ctcgggaccccctcccagctcgccggcaagcgggccacggaggcggcttcccagcccgtg
gacgtgcaggcctacgagaccatcacgagcctcgagcgcctgaccgaatgggtcgaggag
gcgcgcgggcagggtttcgtcgccgtggacacggagacgagcgcgctggacgccaaccaa
gccgatctcgtgggtttctcgctggcgctcgcgcccggcagggccgcctatgtgccgctc
caacatcgcggcgactcggacctgttcggcggcggcctggtgccgggacagatccccgtc
gaggcggcgcttgcggccatccggccgctcctgcaggatccgtccgttctcaagatcggc
cagaacctgaaatacgactgggtcgtcttcaagcggtacggcatcgacctcggccccttc
gacgacaccatgctgatctcctacgtgctcgacgcgggcaagggctcgcacggcatggac
gagctctcgcgccgccatctcgggcactcgcccatcaccttttcggaggtggccggaacg
ggccgcaacaaggtgagtttcgacagggtcgacatcgccagggccacggcctatgcggcc
gaggacgcggacgtgaccttgcgcctgtggcaggtgctcaagccgcggctcgccgccgag
caccgcaccaccgtctacgagaccctggaacggcccctcatcgacgtgatcgcccgcatg
gagatgcgtggcattgcagtggaccgccagatcctcagccgcctctcgggcgacttcgcc
cagagcctcgcgcggctggaggacgagatccacgagatcgcgggcgagaagttcgccctc
ggctctccgaagcagatcggcgacatcctgttcggcaagatgggcctgccgggcgccaag
aagacgccctccggccagtgggcgacccctgcgacccttctggacgaactggcgcaggcc
ggccacgtgctgcccgaaaagatcctcgaatggcgccagctcgccaagctgaaatccacc
tatacggacaccctgcaggagcatatgcatcccgagacgcggcgggtgcacacctccttc
tccctcgcctccaccaccacggggcgcctctcctcctccgagccgaacctgcagaacatc
ccgatccgcacggaagccggccgcaagatccgcaaggccttcgtggcgccggaaggctcc
aagatcatctcggccgattacagccagatcgagctgcgcatcctggcgcatatcgccgac
attccgcagttgcaggaggccttcgccaagggccaggacattcacgcggccaccgcctcg
gccatgttcggcgtgccgctcgaccagatgacgcctgacctgcgccggcaggccaagacc
atcaatttcggcatcatctacggcatttcggccttcggccttgcggtgcgcctcggcata
cccaatgcggatgcggccgccttcatcaagcagtatttcgagcgcttcccgggcatccgc
gcctatatggacgagatcaagaagacgacacgcgagaagggctatgtcaccaccctgttc
gggcgcgtgtgccactatccgcagatcaagtccggcaacccgtcggagcgcgccgccgta
gagcgccaggccatcaacgcgccgatccaggggacggccgccgacatcatccgccgggcc
atgatccgcatggaggacgcgctgaaggccgagcgcctctcggcccgcatgctcctacag
gtccatgacgaactggtgttcgaggcgcccgacgaggagatcgaagcgacgctcccggtc
atctcccgggtgatgactgaggcccccttcccggccgtgaccctgaaggtgccgctcgcc
gtggaagcccgcgcggcgcagaactgggacgaggcgcattag

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