Microvirga sp. 17 mud 1-3: C4E04_20380
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Entry
C4E04_20380 CDS
T05470
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
miv
Microvirga sp. 17 mud 1-3
Pathway
miv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
miv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C4E04_20380 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
miv03400
]
C4E04_20380 (xth)
Enzymes [BR:
miv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
C4E04_20380 (xth)
DNA repair and recombination proteins [BR:
miv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
C4E04_20380 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AWM89281
UniProt:
A0A2Z3ILF4
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All DBs
Position
4333001..4333813
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AA seq
270 aa
AA seq
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MKLTVSTWNINSVRLRIDHVRRFLAERRPDVLCLQETKCPNDKFPLKELQSFGYPFVVHL
GQKGYNGVAILSRYPFAQTSTMEMCGRQDARHITVTLTEAKAASGVTIHNFYVPAGGDIP
DADLNEKFRHKLQFMEELRAWGGRSRPTSAPAILVGDLNVAPLEHDVWSHKQLLDVVSHT
PVETAALEELRQEAGWTDAMRHLRPEPEKIYSWWSYRSPDWAAANKGRRLDHIWLSGDLA
GTLRGIDVTRETRGWERPSDHVPVTAELEL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcaccgtctccacctggaacatcaattccgtccgcctgcgtatcgaccatgtc
cggcgcttcctggcggagcgccgcccggacgtcctgtgcctgcaggagaccaagtgcccg
aacgacaagttccccctgaaggagctccagtccttcggctacccgttcgtggtccatctc
ggccagaagggctataacggggtcgcgatcctgtcccgctatcccttcgcccagacctcc
accatggaaatgtgcggccgccaggatgcccgccacatcaccgtgaccctgaccgaggcc
aaggccgcctcgggcgtgaccatccataatttctacgtcccggccggcggcgacattccg
gatgcggacctcaacgagaaattccgccacaagctccagttcatggaggagctgagggcc
tggggcggccgctcccggccgacttccgctccggcaatcctggtgggcgatctcaacgtg
gctcccctggagcacgatgtgtggagccataagcagctcctcgacgtggtgagccatacg
cccgtcgagaccgcggccctggaagagctgcgccaggaagccggctggaccgatgccatg
cggcacctgcgcccggagcccgagaaaatctattcctggtggagctaccgctcgcccgat
tgggcggccgccaacaagggccgccgcctcgaccatatctggctctcgggcgacctcgcc
ggcaccttgcgcggcatcgacgtaacccgggaaacccgcggctgggagcgcccctcggac
cacgtgcccgtgacggccgagctggagctctga
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