Microbacterium sp. XT11: AB663_002438
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Entry
AB663_002438 CDS
T04243
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
mix
Microbacterium sp. XT11
Brite
KEGG Orthology (KO) [BR:
mix00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mix03019
]
AB663_002438
03009 Ribosome biogenesis [BR:
mix03009
]
AB663_002438
Messenger RNA biogenesis [BR:
mix03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AB663_002438
Ribosome biogenesis [BR:
mix03009
]
Eukaryotic type
Pre-60S particles
RNases
AB663_002438
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ALX66914
LinkDB
All DBs
Position
complement(2529585..2530211)
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AA seq
208 aa
AA seq
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MVSASENDRLVWIDCEMTGLDLSVDELVEIAVVVTDFELQPLDPGFQVVIRPSDAALAHM
NEFVTKMHETSGLIDEIPHGVTLAEAQAQTLAYIKRFAPVERRAPLAGNTIGTDRMFLAK
YMPAVDHWLHYRNVDVSSIKELARRWYPRVFFQAPAKDGGHRALADILESIRELRYYRKA
VFVTEPGPSSDEARDISERTVSEFAPNV
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggtatctgcgtccgagaacgaccgactcgtctggatcgactgcgagatgacgggactc
gatctctcggtcgatgaactcgtcgagatcgccgtcgtggtgaccgacttcgagctccag
ccgctcgaccccggcttccaggtcgtgatccgccccagcgatgcggctctcgcgcacatg
aacgagttcgtcacgaagatgcacgagacgtcgggactgatcgacgagatcccacatggc
gtgacgctggccgaggcccaggcgcagaccctggcgtacatcaagcggttcgctcccgtc
gagcggcgcgccccccttgccgggaacaccatcggcacagaccggatgttcctcgccaaa
tacatgcccgccgtcgatcactggttgcactaccggaacgtcgacgtttccagcatcaaa
gaactcgcgcgccgttggtacccccgcgtgttcttccaggctcccgccaaggacggcggc
catcgcgctctggcagacatcctcgagtcgatccgcgagctccggtactaccgcaaagcg
gtgttcgtgaccgagccaggaccgtccagtgacgaggctcgcgacatctcggagcgcacg
gtgtcagagttcgccccgaacgtgtaa
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