KEGG   Manis javanica (Malayan pangolin): 108391861
Entry
108391861         CDS       T06054                                 

Gene name
MSH2
Definition
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv01524  Platinum drug resistance
mjv03430  Mismatch repair
mjv05200  Pathways in cancer
mjv05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    108391861 (MSH2)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    108391861 (MSH2)
  09162 Cancer: specific types
   05210 Colorectal cancer
    108391861 (MSH2)
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    108391861 (MSH2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mjv03400]
    108391861 (MSH2)
DNA repair and recombination proteins [BR:mjv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     108391861 (MSH2)
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27 ArdA
Other DBs
NCBI-GeneID: 108391861
NCBI-ProteinID: XP_017507205
LinkDB
Position
Unknown
AA seq 934 aa
MAVQPRETLQLESAAEVGFVRFFQGMPEKPATTVRLFDRGDFYTAHREDALLAAREVFKT
QGVVKYMGPAGAKTLESVVLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSACIGVVGIKMSTVDGQRQIGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETSGDMGKLRQVIQRGGILITERKRADFSTKDIHQD
LNRLLKGRKGEQMNSAVLPEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFSQYM
KLDIAAVRALNLFQGSVEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLMDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQGINQLPNVIQA
LEKYEGKHQRLLLAVFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMESTLVSAARDLGLEPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFN
TVDIQKNGVKFTNSKLTSLNEEYTKNKAEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSIVDCILARVGAGDSQLK
GISTFMAEMLETASILRSATKDSLVIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANQIPTVSNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHV
IECAKQKALELEEFQNIGESQRYDEMEPAAKRCFLEREQGEKIIEDFLSKVKQVPFTEMS
EENIIIKLKQLKAEVIAKNNSFVNEIISRIKVTT
NT seq 2805 nt   +upstreamnt  +downstreamnt
atggcggtgcagccgagggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccggccaccacggtgcgccttttcgaccggggc
gacttctacacggcgcaccgtgaggacgcgctgctggccgcccgggaggtgttcaagacc
cagggggtggtcaagtacatggggccggcaggagcaaagactctggagagcgttgtgctt
agtaaaatgaattttgagtcttttgtaaaagaccttcttttggttcgtcagtatagagtt
gaagtttataagaatagagctggaaataaggcctctaaggagaatgattggtatttggcg
tttaaggcttctccaggtaatctttctcagtttgaagacattctctttggtaacaatgat
atgtcagcttgcattggagttgtgggcattaaaatgtctactgttgatggccaaagacag
attggagttgggtatgttgactccatacagaggaaactagggctgtgtgagttccctgat
aatgatcagttctcaaatttggaggctcttctgatacagattggaccaaaagaatgtgtt
ttgccaggaggagagacttctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgacttttctacaaaagatattcatcaagac
ctcaatcggttgttgaaaggcagaaagggtgaacagatgaatagtgctgtcttgccagaa
atggagaatcaggttgcagtttcttcattgtctgcagtaatcaagtttttagaactctta
tcagatgattcaaactttggacagtttgaattgactacttttgacttcagccaatacatg
aaattggatattgcagcagttagagcccttaacctttttcagggttctgttgaagatacc
actggctctcagtctctggctgcactgctgaataaatgcaaaacccctcaaggacaaaga
ctagttaaccagtggattaagcagcctctcatggataagaacagaatagaagagaggtta
aatttagtagaagcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcaaagacaagcagcaaac
ctacaagattgttaccgaatctatcagggtataaaccaactccctaatgttattcaggct
ttggaaaaatatgaaggaaaacaccagcgattgttgttggcagtttttgtgactcctctt
attgatcttcgttctgatttctccaagtttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtaaaaccttcatttgatcctaatctgagtgaa
ttaagagaaataatggatgatttagaaaagaaaatggagtcaacattagtaagtgctgct
agagatctaggcttggaacctggcaaacagattaaactggattctagtgcacagttcgga
tattactttcgtgtaacgtgtaaggaagaaaaagtccttcgtaacaataaaaactttaat
acagtagatatccagaagaatggtgttaaatttaccaacagtaaattgacttctctcaat
gaagagtataccaaaaataaagccgagtatgaggaagcccaggatgccattgtgaaagaa
attgttaatatttcttcaggctatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgctgttgtcagctttgctcatgtgtcaaatggagcacctgttccatatgta
cgaccagtcattttggagaaaggacaaggaagaattacattgaaagcatccagacatgct
tgtgttgaagttcaagatgaagttgcatttattcctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatcaacatatattcgc
caaactggagtgatagtcctcatggcccaaattgggtgttttgtgccatgtgagtcagca
gaagtgtccattgtcgattgcatcttggcccgggtaggggctggtgacagtcaattgaaa
ggaatctccacattcatggctgaaatgttagaaactgcttctattctcagatctgcaacc
aaagattccttagtaatcatagatgagttgggaagaggaacctctacctatgatggattt
gggttagcatgggctatatcagagtacattgcaacaaagattggtgctttttgcatgttt
gcaacccattttcatgaacttactgctttggccaaccagatacctactgttagtaatcta
catgtcacagcactaaccactgaagagaccctaactatgctctatcaggtgaagaaaggt
gtctgtgatcagagttttgggattcacgttgcagagcttgctaatttccctaagcatgtc
atagagtgtgctaaacaaaaagcactggaactagaggagtttcagaatattggagaatca
caaagatatgatgaaatggaaccagcagcaaaaaggtgctttctggaaagagagcaaggt
gaaaaaattattgaagactttttatccaaggtgaagcaagtgccctttactgaaatgtca
gaagaaaacatcataataaagttaaaacagctgaaagctgaggtaatagcaaagaataat
agttttgtaaatgaaatcatttcacgaataaaagttactacatga

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