Manis javanica (Malayan pangolin): 108395768
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Entry
108395768 CDS
T06054
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mjv04121
]
108395768 (TRIM56)
Enzymes [BR:
mjv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108395768 (TRIM56)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108395768 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
108395768
NCBI-ProteinID:
XP_017513796
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MVSQGSSPSLLEALSSDFLACKICLEQLRVPKTLPCLHTYCQDCLAQLAERGHLRCPECR
ETVPLPPAGVAAFKTNFFVNGLLDLVRARAGGDLQAGKPACALCPLMGGASTGGPATARC
LDCADDLCKACADGHRCTRQTHTHRVVDLVGYRAGWYDEEARERQAAQCPQHPGEALRFL
CQPCSQLLCRECRLDPHLDHPCLPLAEAVRARRPGLEELLKGVDNNLAELEASRLVEKKS
LARLREQAARVGTQVEEAAERVLRVLLAQKQEVLGQLRAHVEAAEEAARERLGKLEGREQ
VARAAVAFARRVLSLGREAEILSLEGAIAQRLQQLQGCAWVPGPPPCLLPQLELHPGLLD
KNCQLLQLSFEEQQPQKDSGRDGAGCQGDEETPSRRQDGAQPQGRDGAQTPKSDRAQTPQ
EDGAPKGERPKSPQEDRAQTPQEDGGAQTPRAGRSNKKRKFKGRLKSVSREPSPVPGLNL
EGSGLLPRPIFSCSFPTRMPGDKRSPRITGLCPFGPREILVADEQNRALKRFSLNGDYKG
AVPVPEGCSPCSVAALRGAVAFSAGARLHLISPDGEVQWRRALSLSQASHAVAAMPSGDR
VAVSVSGHVEVYNMEGSLATRFIPGGKASRGLRALVFLTTSPQGNFVGSDWQQNSVVVCD
GLGQVIGEYRGPGLHGCQPGSVSVDKKGYIFLTLREVNKVVILDPEGSLLGDFLTAYHGL
EKPRVTTMVDGRYLVVSLSNGTIHVFRVRSPDS
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggtttcccaaggatcctcaccctccctgctagaggccctgagcagcgatttcctggcc
tgtaaaatctgcctggagcagctgcgggtgcccaaaacattgccctgcctgcacacctac
tgccaggattgcctggctcagctggctgagcgtggccacctgcgatgccccgagtgccgc
gagacggtgccccttccaccagcaggcgtggctgctttcaagaccaacttctttgtcaac
gggctcctggatttggtgagggcccgggctggtggagacctgcaggcagggaagccagcc
tgcgcactgtgccccttgatggggggtgccagcactgggggcccagccacagcccggtgc
ctggactgtgcggatgatttgtgcaaggcctgtgctgatgggcaccgctgcacgcggcag
acccacacccaccgagtggtggacctggtgggctacagggcagggtggtatgacgaggag
gcccgggagcgccaggcggcccagtgtccccaacacccaggggaggccctgcgcttcctg
tgccagccctgctcccagctgctgtgtcgcgagtgccgcctggacccccacctggaccac
ccctgcctgcccctggctgaggccgtgcgtgcccggaggccaggccttgaggagctactg
aagggcgtggacaacaacctggcagagctggaagcctcccggctggtggaaaaaaaatct
ttggcccgcctgagggagcaggcggcccgggtggggacgcaggtggaggaggcggccgag
agggtccttcgggtcctcctggcccagaagcaggaggtgctggggcagctacgggcccat
gtggaggctgccgaggaggctgctcgggagaggctggggaagctggagggccgggagcag
gtggccagggcggcagtcgcctttgctcgtcgggtgctcagcctgggtcgtgaggccgag
atcctctcactggagggggcgatcgcccagaggctccagcagctgcagggctgtgcctgg
gtgcctgggccacccccctgcctgctgccacagctggagctccatccagggcttctggac
aagaactgccaactgctacagctctcctttgaggagcagcaaccccagaaggacagtggt
agagatggagctggatgccagggagatgaggaaaccccgagccggagacaggatggagcc
cagccccagggtagggatggggcccagaccccaaagtcagacagagcccagacacctcag
gaagatggagccccaaagggcgagagacccaagtcaccccaggaagatagagcccagacg
ccccaagaagatggaggagcccagaccccaagggctggcagatccaacaagaaaaggaag
ttcaaaggcagactcaagtcagtttcccgggagcccagcccagtgcccgggctgaacctg
gagggctccggcctcctccccaggcccatcttttcctgcagcttccccacgcggatgccc
ggagacaagcgctcaccccgcatcactgggctctgtccctttggcccccgggagatcctg
gtggcagatgagcagaacagggcactgaagcgtttctccctcaatggtgactacaagggc
gcggtgcctgtccctgagggctgctccccatgcagtgtggctgccctgcggggcgctgtg
gccttttcggccggggcgcggctccatctcatcagccctgatggtgaggtgcagtggcgc
cgggccctgagtctctcccaggccagccatgctgtggctgcaatgccaagtggggaccgg
gtggctgtcagcgtgtcaggccatgtggaggtgtacaacatggaaggcagcctggccacc
cggtttattcctgggggcaaggccagccggggcctgcgggcactggtgttcctgaccacc
agtccccagggcaattttgtggggtcagattggcagcagaatagcgtggttgtctgtgat
gggctgggtcaggtgattggggagtaccgagggccgggcctgcatggctgccagccaggc
tccgtgtctgtggataagaagggctacatctttctgaccctccgagaggtcaacaaggtg
gtgatcctggatccggaggggtcactgctcggtgatttcctgacagcctatcatggcctg
gaaaagccccgggtgaccaccatggtggatggcaggtacctggttgtgtccctcagtaat
gggaccatccatgtctttcgggtccgctctcctgacagttaa
DBGET
integrated database retrieval system
