KEGG   Manis javanica (Malayan pangolin): 108398696
Entry
108398696         CDS       T06054                                 
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
mjv  Manis javanica (Malayan pangolin)
Pathway
mjv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mjv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108398696 (SF3B1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mjv03041]
    108398696 (SF3B1)
   03036 Chromosome and associated proteins [BR:mjv03036]
    108398696 (SF3B1)
Spliceosome [BR:mjv03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    108398696 (SF3B1)
 Complex B
    108398696 (SF3B1)
 Complex C
   U2 SnRNP specific factors
    108398696 (SF3B1)
Chromosome and associated proteins [BR:mjv03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    108398696 (SF3B1)
SSDB
Motif
Pfam: SF3b1 HEAT_EZ Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG Adaptin_N UNC45-central TALPID3
Other DBs
NCBI-GeneID: 108398696
NCBI-ProteinID: XP_017518352
LinkDB
Position
Unknown
AA seq 1304 aa
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq 3915 nt   +upstreamnt  +downstreamnt
atggcgaagatcgccaagacgcacgaagatattgaagcacagatacgagaaattcaagga
aagaaggcagctcttgatgaagctcaaggtgtgggccttgattctacaggttattatgac
caggaaatttatggtgggagtgacagcagatttgctggatacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagacggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttgactaaagaagaaagagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagctgatcagacacctggtgcaactcccaaaaagctatcaagttgggatcaa
gcagagacccctggacacaccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagccac
acaccagcgggagctgctactcctggacgaggtgatacaccaggccacgcaacaccaggc
catggcggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattcaattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagccagatggggggaagcactcctgttctgactcctggaaaaacaccgatt
ggcaccccagccatgaatatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccactatct
gatgaagaattagatgctatgttcccagaaggatataaggtacttccccctccagctggt
tatgttcctattcgaactccagctcgaaaactgacagcaactccaacacctttaggtggt
atgactggtttccacatgcaaactgaagacagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgagtcaacacttagtccagaagagcagaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacacctccaatgagaaaagctgcattgcgccagattact
gataaagctcgagaatttggagctggtcctttgtttaaccagattctccctctactgatg
tcacctacacttgaggatcaagaacgtcatttacttgtgaaagttattgacagaatatta
tacaaacttgatgacttagttcgaccctatgtgcacaagatccttgtggtcattgaacca
ttgttgattgatgaagattactatgctagagtggaaggccgagagatcatttctaatttg
gcaaaggctgctggtttggctactatgatctctaccatgagacctgatatagataacatg
gatgaatatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattgttgccctttttaaaagctgtatgcaaaagcaagaagtcttggcaagca
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgaacatggtcttgtggatgagcaacagaaa
gttcggaccattagtgctttggccatcgctgccttggctgaagcagcaactccttatggt
attgagtctttcgattctgtgttaaagccgttatggaagggtatccgccaacacagagga
aagggtctggccgctttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatcctaattcgagaatttcagtcacct
gatgaagaaatgaagaaaattgtgctaaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttctggcaa
cacagaatggctttggacagaagaaattatcgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgacttgaaagacgaa
gctgagcagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gctgcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtgatgttgaatggctttggcacagtggtcaatgct
cttggcaagcgagtcaaaccttatttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagccaaagttaggcaacaggcagctgacttgatctctcgaactgccgtt
gtcatgaagacgtgtcaagaggaaaaattgatgggacacttgggtgttgttttatatgag
tatttgggagaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctcctgcccagactc
actcccatcttaaagaacaggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtctgcaagagaatggatgagaatttgcttt
gagcttttagagctcttaaaagcacacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttctaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgcg
gaaacatgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgtccaaaatggagttttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggatagg
gaccttgtacacaggcagacggctagtgcagtggtgcaacatatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttc
gagacatcgccccatgttattcaggcagttatgggagccttggagggcctaagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcatccagctcggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctt
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttacgaactt
gactatatcttgtaa

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