Manis javanica (Malayan pangolin): 108398696
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Entry
108398696 CDS
T06054
Symbol
SF3B1
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
KO
K12828
splicing factor 3B subunit 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108398696 (SF3B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mjv03041
]
108398696 (SF3B1)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108398696 (SF3B1)
Spliceosome [BR:
mjv03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108398696 (SF3B1)
Complex B
108398696 (SF3B1)
Complex C
U2 SnRNP specific factors
108398696 (SF3B1)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108398696 (SF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
HEAT_EZ
Htt_N-HEAT_1
HEAT_2
XMAP215_CLASP_TOG
Adaptin_N
UNC45-central
TALPID3
Motif
Other DBs
NCBI-GeneID:
108398696
NCBI-ProteinID:
XP_017518352
LinkDB
All DBs
Position
Unknown
AA seq
1304 aa
AA seq
DB search
MAKIAKTHEDIEAQIREIQGKKAALDEAQGVGLDSTGYYDQEIYGGSDSRFAGYVTSIAA
TELEDDDDDYSSSTSLLGQKKPGYHAPVALLNDIPQSTEQYDPFAEHRPPKIADREDEYK
KHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEEREIRQQLAEKAKAGE
LKVVNGAAASQPPSKRKRRWDQTADQTPGATPKKLSSWDQAETPGHTPSLRWDETPGRAK
GSETPGATPGSKIWDPTPSHTPAGAATPGRGDTPGHATPGHGGATSSARKNRWDETPKTE
RDTPGHGSGWAETPRTDRGGDSIGETPTPGASKRKSRWDETPASQMGGSTPVLTPGKTPI
GTPAMNMATPTPGHIMSMTPEQLQAWRWEREIDERNRPLSDEELDAMFPEGYKVLPPPAG
YVPIRTPARKLTATPTPLGGMTGFHMQTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLV
DVDESTLSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFGAGPLFNQILPLLM
SPTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARVEGREIISNL
AKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPFLKAVCKSKKSWQA
RHTGIKIVQQIAILMGCAILPHLRSLVEIIEHGLVDEQQKVRTISALAIAALAEAATPYG
IESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTREVMLILIREFQSP
DEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDRRNYRQLVDTTVEL
ANKVGAAEIISRIVDDLKDEAEQYRKMVMETIEKIMGNLGAADIDHKLEEQLIDGILYAF
QEQTTEDSVMLNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKVRQQAADLISRTAV
VMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRL
TPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLKAHKKAIRRATVNT
FGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPE
LNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVY
GFGCEDSLNHLLNYVWPNVFETSPHVIQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARK
VRDVYWKIYNSIYIGSQDALIAHYPRIYNDDKNTYIRYELDYIL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgccaagacgcacgaagatattgaagcacagatacgagaaattcaagga
aagaaggcagctcttgatgaagctcaaggtgtgggccttgattctacaggttattatgac
caggaaatttatggtgggagtgacagcagatttgctggatacgtgacatcaattgctgca
actgaacttgaagatgatgacgatgactactcatcatctacaagtttgcttggtcagaag
aagccaggatatcatgcccctgtggcattgcttaatgatataccacagtcaacagaacag
tatgatccatttgctgagcaccgacctccgaagattgcagaccgggaagatgaatacaaa
aagcacaggcggaccatgataatttccccagagcgtcttgatccttttgcagacggaggg
aagacccctgatcctaaaatgaatgctaggacttacatggatgtaatgcgagaacagcat
ttgactaaagaagaaagagaaattaggcaacagctagcagaaaaagctaaagctggagaa
ctaaaagtcgtcaatggagcagcagcatcccagcctccctcaaaacgaaaacggcgttgg
gatcaaacagctgatcagacacctggtgcaactcccaaaaagctatcaagttgggatcaa
gcagagacccctggacacaccccttccttaagatgggatgagacaccaggtcgtgcaaag
ggaagtgagactcctggagcaaccccaggctcaaaaatatgggatcctacacctagccac
acaccagcgggagctgctactcctggacgaggtgatacaccaggccacgcaacaccaggc
catggcggtgcaacttccagtgctcgtaaaaacagatgggatgagacccccaaaacagaa
agagatactcctgggcatggaagtggatgggctgagactcctcgaacagatcgaggtgga
gattcaattggtgaaacaccaactcctggagccagtaaaagaaagtcacgttgggatgaa
acaccagctagccagatggggggaagcactcctgttctgactcctggaaaaacaccgatt
ggcaccccagccatgaatatggctacccctactccaggtcacataatgagtatgactcct
gaacagcttcaggcttggcggtgggagagagaaattgatgagagaaatcgcccactatct
gatgaagaattagatgctatgttcccagaaggatataaggtacttccccctccagctggt
tatgttcctattcgaactccagctcgaaaactgacagcaactccaacacctttaggtggt
atgactggtttccacatgcaaactgaagacagaactatgaaaagtgttaatgaccaacca
tctggaaatcttccatttttaaaacctgatgatattcagtactttgataaacttttggtt
gatgttgatgagtcaacacttagtccagaagagcagaaagagagaaaaataatgaagttg
cttttaaaaattaagaatggaacacctccaatgagaaaagctgcattgcgccagattact
gataaagctcgagaatttggagctggtcctttgtttaaccagattctccctctactgatg
tcacctacacttgaggatcaagaacgtcatttacttgtgaaagttattgacagaatatta
tacaaacttgatgacttagttcgaccctatgtgcacaagatccttgtggtcattgaacca
ttgttgattgatgaagattactatgctagagtggaaggccgagagatcatttctaatttg
gcaaaggctgctggtttggctactatgatctctaccatgagacctgatatagataacatg
gatgaatatgtccgtaacacaacagctagagcttttgctgttgtagcctctgccctgggc
attccttcattgttgccctttttaaaagctgtatgcaaaagcaagaagtcttggcaagca
agacacactggtattaagattgtacagcagatagctattcttatgggctgtgccatcttg
ccacatctcagaagtttagttgaaatcattgaacatggtcttgtggatgagcaacagaaa
gttcggaccattagtgctttggccatcgctgccttggctgaagcagcaactccttatggt
attgagtctttcgattctgtgttaaagccgttatggaagggtatccgccaacacagagga
aagggtctggccgctttcttaaaggctattgggtatcttattcctctcatggatgcagaa
tatgccaactactatactagagaagtgatgttaatcctaattcgagaatttcagtcacct
gatgaagaaatgaagaaaattgtgctaaaggtggtaaagcagtgttgtggaacagatggt
gtagaagcaaactacattaaaacagagattcttcctcctttttttaaacacttctggcaa
cacagaatggctttggacagaagaaattatcgacagttagttgatactactgtggagttg
gcaaacaaagtaggtgcagcagaaattatatccaggattgtggatgacttgaaagacgaa
gctgagcagtacagaaaaatggtgatggagacaattgagaaaattatgggcaacttggga
gctgcagatattgatcataaacttgaagaacaactgattgatggtattctttatgctttc
caagaacagactacagaggactcagtgatgttgaatggctttggcacagtggtcaatgct
cttggcaagcgagtcaaaccttatttgcctcagatctgtggtacagttttgtggcgttta
aataacaaatcagccaaagttaggcaacaggcagctgacttgatctctcgaactgccgtt
gtcatgaagacgtgtcaagaggaaaaattgatgggacacttgggtgttgttttatatgag
tatttgggagaagagtaccctgaagtattgggcagcattcttggagcactgaaggccatt
gtaaatgtaataggtatgcataagatgaccccaccaattaaagatctcctgcccagactc
actcccatcttaaagaacaggcatgaaaaagtacaagagaattgtattgatcttgttgga
cgtattgctgacaggggagctgaatatgtgtctgcaagagaatggatgagaatttgcttt
gagcttttagagctcttaaaagcacacaaaaaagctattcgtagagccacagtcaacaca
tttggttatattgcaaaggccattggccctcatgatgtattggctacacttctaaacaac
ctcaaagttcaggaaaggcagaacagagtttgtaccactgtagcaatagctattgttgcg
gaaacatgttcacccttcacagtactacctgccttaatgaatgaatacagagttcctgaa
ctgaatgtccaaaatggagttttaaaatcactttccttcttgtttgaatatattggtgaa
atgggaaaggactacatttatgctgtaacaccattacttgaagatgctttaatggatagg
gaccttgtacacaggcagacggctagtgcagtggtgcaacatatgtcacttggggtttat
ggatttggttgtgaagattcactgaatcacttgttgaactatgtatggcccaatgtgttc
gagacatcgccccatgttattcaggcagttatgggagccttggagggcctaagagttgct
attggaccatgtagaatgttgcagtattgtttacagggtttgtttcatccagctcggaaa
gtcagagatgtgtattggaaaatttacaactccatctacattggttcacaggatgctctt
atagcacattacccaagaatctacaatgatgataagaacacctatattcgttacgaactt
gactatatcttgtaa
DBGET
integrated database retrieval system