Methanopyrus kandleri: MK0061
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Entry
MK0061 CDS
T00078
Symbol
recJ
Name
(GenBank) Single-stranded DNA-specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mka
Methanopyrus kandleri
Pathway
mka03410
Base excision repair
mka03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MK0061 (recJ)
03430 Mismatch repair
MK0061 (recJ)
03440 Homologous recombination
MK0061 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mka03400
]
MK0061 (recJ)
DNA repair and recombination proteins [BR:
mka03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MK0061 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MK0061 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MK0061 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
AAM01278
UniProt:
Q8TZ78
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All DBs
Position
complement(58044..59066)
Genome browser
AA seq
340 aa
AA seq
DB search
MDPTKEVRNALVPHLKKLKDERVAVISDIDVDGLASAAILGHVLNNVGADFVLYFSPPAN
FEEVVSGIAPECDVLIAADLGSTGETAIHDAKSEGCRVIVVDHHQVLEDVRPDVFIHDTR
LCAAELCYWATVDLHERDLRLIAAYAAFTDYAEEYSRVLRETLKMYDRRKVYTEASLLDY
ALIRMDGEDRRELALKLPETPVSELDEVYELARDAMAEEHEVLRRAREVAECLNEVVAYA
IMDDVHPAMTGRVASHVAGVKRRPVGVCVRRGKISARVVEGEEIDVARAIRKAATEVGGK
GGGHAPAAGGVVPESRVEEFLRLFGEEVKRQVESARTRKS
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttggaccccactaaggaggtaaggaacgcgctggtcccccacctgaagaaactgaaggac
gagcgagtcgcggtaatttcggatatcgacgtggacgggttggcgagcgccgcgatcctc
ggtcacgtgctgaacaacgtcggggcggacttcgtgctgtacttctcccctcccgctaac
ttcgaggaagtcgtctccggaatcgctccggagtgtgatgtgctgatagccgcggaccta
gggtctaccggggagacggcgattcacgacgccaagtccgaggggtgtcgggtgatcgtc
gtagaccatcaccaggtactcgaggacgtgcgacccgacgtgttcatccacgacaccagg
ctctgtgcggccgagctctgctattgggccacggtcgatctgcacgagcgtgacctacga
ctcatcgccgcatacgcagccttcacagactacgccgaggagtactcccgagtactccga
gagaccctcaagatgtacgaccggcgcaaggtttacacggaggcgagcctgctcgactac
gcgctgatccggatggatggtgaagaccgccgggagttggcgctcaagctcccggagact
cccgtctccgagctggacgaagtgtatgagctcgctcgcgatgctatggcagaggaacac
gaggtgctccgtcgggcgagggaggtggcggaatgcctgaacgaagtcgtcgcgtacgcg
atcatggacgacgtccaccccgcgatgaccggaagggtcgcatcccacgtagcgggcgtg
aagcgaagacccgtgggcgtatgcgttcgacggggaaagatcagcgcccgggtagtcgag
ggagaggaaatcgacgtagcccgagcgatcagaaaggcggcgaccgaggtgggcggaaag
ggcggtggacacgcaccggcggccgggggcgtcgtccccgaaagcagggtcgaggagttc
ctgagactgttcggggaggaggtgaagagacaggtcgaaagcgcccggacgaggaagtcg
tga
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