Methylacidiphilum kamchatkense: kam1_1415
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Entry
kam1_1415 CDS
T06102
Name
(GenBank) 3'-5' exoribonuclease
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
mkc
Methylacidiphilum kamchatkense
Brite
KEGG Orthology (KO) [BR:
mkc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mkc03019
]
kam1_1415
Messenger RNA biogenesis [BR:
mkc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
kam1_1415
BRITE hierarchy
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GFIT
Motif
Pfam:
HD
TraI_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QDQ42637
UniProt:
A0A0C1V6N4
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All DBs
Position
1401942..1403018
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AA seq
358 aa
AA seq
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MQTEEKIKSLSELSERIGQIESLSGSIRCQLVSTKESTTRNGSFFLDIEIADHSGNKKIK
IWQESKAYASFLTLPKNAFVEFSATFRNSSYGLQAIVHTLRVLNQEEIQELLEPNRNAEI
QADWELLQKKIGSIADPRLNRLCSQFLIDYGERFKRAAAAREYHHNFRGGLLRHVCQMIQ
AAEGLMAAYPVYNWDLIKAGILFHDCGKLWENDFQEQGFVMKRSKTAELIGHIPIGVEIV
NSLWRSLQHSEEFHKALIPPSDLVRVHLLHLIVSHHGLREYGSPVTPRTPEAWILHILDN
LDAKLEMFRCAYEEGKEVVPGIFERRPPLEGYPIAPLSKYTSTPKPSTEETAPENLMD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcagacggaagaaaaaataaagagccttagcgaactttctgaaagaataggacaaata
gaaagtttaagtgggagtattcgctgccaactagtatctacaaaagaatctactacccga
aacggatcttttttcctagatattgaaattgcagaccattcaggaaacaaaaaaattaaa
atatggcaggaatcaaaagcctatgcttcttttttaacactgccaaagaacgcctttgtc
gaattttcagcgacttttcgcaatagctcctatggtttgcaagcgatcgtccatactctg
agggttttaaaccaagaagaaatacaagaacttcttgaaccaaaccgcaatgctgaaatt
caagcggattgggaactgcttcaaaaaaaaataggctccatagcagatcctcgccttaat
cgcttatgttcccaattcctaatcgactatggagaaagattcaaaagggcggcggctgct
agagaataccatcataatttccgtggtggcttgctcagacatgtatgccaaatgatccaa
gctgccgaagggttgatggcagcttatcctgtgtacaactgggaccttatcaaagcgggg
atccttttccatgattgtggaaaactctgggaaaacgatttccaagaacaggggtttgtc
atgaaaagaagcaaaacagccgaactcattggccacatcccaataggggtagaaattgtc
aactccttgtggagaagcctgcaacatagcgaggaatttcacaaagccttgattccccct
tcagatctagtccgagtccatctccttcacttaatcgtttcccatcacggtcttagagaa
tatggctctcctgtgaccccaaggacgccagaggcttggattcttcatatcctcgataat
ctggatgcaaaattagagatgtttcgttgcgcctatgaagaggggaaagaagttgtacct
ggcatctttgaaagaaggcctcctctagaaggctatcctattgctcccttaagcaagtat
acatccaccccaaagccttcgactgaggagaccgctccagaaaaccttatggactaa
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