Mycobacterium sp. KMS: Mkms_0990
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Entry
Mkms_0990 CDS
T00442
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Mkms_0990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_0990
Enzymes [BR:
mkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
Mkms_0990
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Mkms_0990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ABL90204
UniProt:
A1UBJ6
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All DBs
Position
1086268..1087074
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AA seq
268 aa
AA seq
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MRLLALVGGVSAGAPRLGCVLIGSHVRNDDPLAAAEADGADVVQFFLGDPQSWKKPKPRE
DAEVLKASSIPLYVHAPYLINVASANNRVRIPSRKILQDTCDAAAEVGATAVIVHGGHAD
DKDMEAGFERWVKALDRLETTVPVYLENTAGGEHAMARYFDTIGRLWDHIGDYGIGFCLD
TCHAWAAGEALVDAVSRIKRITGRIDLVHCNDSRDAAGSGADRHANFGNGQIDPQLLVAV
VQAADAPVICETSDDGRKDDIAFLRENV
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtctgctcgcgctggttgggggtgtgtcggcgggcgcgcctagactcggctgcgtg
ctcatcggttcacatgtccgcaacgacgatcccctggccgctgccgaggccgacggcgcc
gacgtggtgcagttcttcctcggcgacccgcagagctggaagaaacccaaaccgcgcgag
gacgccgaggtgctgaaggcgtcgagcatcccgctctacgtgcatgcgccgtacctgatc
aacgtcgcgtcggcgaacaaccgggtgcgaatcccgtcgcgcaagatcctgcaggacacc
tgcgatgcggccgccgaggtgggcgccaccgcggtgatcgtgcacggcggccacgccgac
gacaaggacatggaggccgggttcgagcggtgggtcaaggcgctcgaccggctcgagacc
acggtgcccgtctacctggagaacaccgccggcggcgagcacgcgatggcgcgctacttc
gacaccatcggccggctgtgggaccacatcggcgactacggcatcgggttctgcctcgac
acctgccacgcgtgggcggccggcgaggcgctggtcgacgccgtctcgcggatcaagcgg
atcaccggccgcatcgacctcgtccactgcaacgactcgcgtgatgccgcgggttcgggg
gccgaccggcacgccaacttcggcaacggccagatcgacccgcaactgctggtcgcggtg
gtgcaggccgccgacgctccggtcatctgcgagacctccgacgacgggcggaaggacgac
atcgcgttcctgcgcgagaacgtctga
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