KEGG   Methylomonas koyamae: MKLM6_3587
Entry
MKLM6_3587        CDS       T05118                                 
Name
(GenBank) RNA polymerase subunit sigma-24
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mko  Methylomonas koyamae
Brite
KEGG Orthology (KO) [BR:mko00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mko03021]
    MKLM6_3587
Transcription machinery [BR:mko03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MKLM6_3587
SSDB
Motif
Pfam: DUF6596 Sigma70_r4_2 Sigma70_r2 TPR_2 TPR_7 TPR_21 TPR_1 ANAPC5 UPF0180 Sigma70_r4 TPR_12
Other DBs
NCBI-ProteinID: ATG91774
UniProt: A0A291INF5
LinkDB
Position
4069632..4070918
AA seq 428 aa
MRDPDRQPPTTVKPTAETAAAVRNNIDALYRAESRRVFATLIRLLGDFEIAEEALHDAFR
SALEQWPRDGIPANPRAWLVSAGRFKGVDKLRRQSRYDLYEDMAQVAGTESASSDLDGDG
LEDDRLRLIFTCCHPALPAEAQVALTLREVCGLATEEIARAFLLPTPTLAQRIVRAKAKI
RDAKIPYRTPERGELAERLPPVLQVVYLVFNEGYSASSGPELNRPDLSAEAIRLGRLLVE
LLPAAEVQGLLALMLLHESRRPARRSADGELVLLEDQDRSLWASALIEEGLQRVEQALRQ
PGYGVYALQAAIAAVHAGATSAAATDWRQIAGLYEVLLKLAPSPVIALNRAVAIAMRDGP
AAGLALIDAILAEGNLADYHLAHAARADLLRRLGHTDSALHAYQTALALAKQEPERRFLQ
RRIGELGG
NT seq 1287 nt   +upstreamnt  +downstreamnt
atgcgcgacccggaccgccaaccgccaaccaccgtgaagccgaccgccgaaaccgccgcg
gccgtccgcaacaatatcgatgcgctttaccgcgccgaatcgcggcgggtgtttgcgacg
ctgattcggctgctcggcgatttcgaaattgccgaggaagccctgcacgatgcgtttcgc
agcgcattggaacaatggccgcgcgacggcatcccggccaatccgcgcgcttggctggta
tcggccggccgtttcaaaggcgtcgataaactgcgccggcaaagccgctacgacttatac
gaagatatggcgcaagtcgccggaaccgaatcggcgtcgtccgatctcgacggcgacggc
ctggaagacgaccggctgcggctgatctttacctgttgccatccggcgctgccggccgaa
gcccaggtcgcgctgacgttacgcgaagtgtgcggtttggccaccgaggaaatcgcccgc
gcctttctgttaccgacgccgaccctggcgcaacgcatcgtccgtgccaaggccaaaatc
cgcgacgccaaaattccgtaccgaacgccggaacgcggcgagctggccgaacgcttgccg
ccggtgttgcaagtggtgtatttggtattcaacgaaggttactcggcctcgtccgggccg
gagttaaaccgtcccgacttatccgcggaagcgattcggctgggccggctgttggtcgaa
ttattgccggccgccgaagtgcaagggttactggcattaatgctattgcacgaatcgcgc
cgtcccgctcgccgcagcgccgacggcgaactggtcttgctggaggaccaggaccggtct
ttatgggcctcggccctgattgaggaaggtttgcaacgggtggagcaagccttgcgccag
ccgggttacggcgtctacgctctacaagccgctatcgccgcagttcacgccggcgcaacc
tcggcggccgctaccgactggcggcaaatcgccgggttatacgaggtgttgttgaagctg
gcaccttcgccggtcattgcattgaaccgcgcggttgccatcgccatgcgcgacggcccc
gccgccggcctggctttgatcgacgctatcctggccgaaggcaatctggccgactaccat
ctggcccacgccgcccgcgccgacttattgcgccgcctggggcacaccgattctgcactg
cacgcctaccaaacggcgctggcattggcaaagcaggaaccggagcggcgttttctgcaa
cgccggatcggcgaactcggcggttaa

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