KEGG   Mycobacterium liflandii: MULP_04790Help
Entry
MULP_04790        CDS       T02444                                 

Definition
(GenBank) ATP dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mli  Mycobacterium liflandii
Pathway
mli03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mli00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    MULP_04790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mli03400]
    MULP_04790
Enzymes [BR:mli01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     MULP_04790
DNA repair and recombination proteins [BR:mli03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     MULP_04790
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C RNA_ligase DNA_primase_S
Motif
Other DBs
NCBI-ProteinID: AGC64295
UniProt: L7VCM2
LinkDB All DBs
Position
complement(5217591..5220107)
Genome map
AA seq 838 aa AA seqDB search
MYSAIRRPRASRPMWVSRSTSRPNLASPTATLRGLPPTYSAGSGPSTMSIRASPITSPRA
MATGYVGHMGSAQAWPPGQANGPQVTLTNADKVLYPATGTTKSDVFGYYTGIAEVMIPHI
AGRPATRKRWPNGVDQASFFEKQLASSAPDWLPRASVVHRSGTTTYPIIDSATGLAWIAQ
QAALEVHVPQWRFVAEWTSKGEILTPGPATRLVFDLDPGEGVTMAQLAQVAWAVRDLLAD
IGLSTLPLTSGSKGLHLYTPLDEPVSSKGATVLAKRVAQQLETVMPALVTATMTKSLRAG
KVFLDWSQNSGSKTTIAPYSLRGREQPTVAAPRSWEELDDPGLRQLTYDEVLARLTRDGD
LIAALDADLPGDDRLLKYRSMRNASKTPEPVPRARPVVGQGNTFVIQEHHARRLHYDFRL
ERDGVLVSWAVPKNLPETTSVNHLAVHTEDHPLEYATFEGNIPKGEYGAGKVIIWDSGTY
DTEKFRDDSRNGAEKGEVIVNLHGSRISVRYALIQTNGDQWLAHRMKDQTAFDFDTLAPM
LTSHGSVAGLESGQWAFEGKWDGYRLLVEADHGALRLRSRSGRDVTAEYPQLRSLAADLA
DHHVVLDGELVALDSSGVPSFNEMQNRVRATRIEFWAFDLLFLDGRSLLRARYRDRRKLL
ETLGSAGNLIVPELLPGDGAEALAYSHKRGWEGVIAKRRDSGYQPGRRSSAWIKDKHWNT
QEVVIGGWRVGEGGRSSGIGSLLMGIPGPSGLHFAGRVGTGFTERDLANLKKTLVPLHTD
ESPFDAALPAREAKGVTFVAPTLVGEVRYSEWTPDDRLRQSSWRGLRPDKNPSEVVRE
NT seq 2517 nt NT seq  +upstreamnt  +downstreamnt
atgtactcggcgatccgtcgtccgcgggcgtcgcggccgatgtgggtcagcagatcgacg
tcgcggcccaatctggccagtccgaccgcgacgttgagggggctgcccccgacgtactcg
gccgggtccggcccatcgacgatgtcgatcagggcttcaccgatcaccagcccacgtgcc
atggcgacaggttacgttggccatatgggttcggcgcaggcctggcctcctggacaggcg
aatggtccgcaggtgacgctgaccaacgcggacaaggtgctgtacccggctaccggaacc
accaagtctgacgtcttcggttactacaccggcatcgccgaggtgatgatcccgcatatc
gccgggcgcccggcgactcgcaagcgctggcccaacggcgtcgatcaggcgtcctttttc
gaaaagcagctggcgtcgtcggcgccggactggctgccgcgtgccagcgtggtgcaccgg
tcgggaacgacgacctatccgatcatcgacagcgccaccgggctggcctggatcgcacaa
caggccgccctcgaggtgcacgtcccgcagtggcggttcgttgccgagtggacgtccaaa
ggcgaaatcctcacgcccgggccggccacccgattggtgttcgacctggacccgggcgag
ggcgtgacgatggcccaactcgcgcaggtggcgtgggcggtgcgcgatctgctcgccgac
atcggcctgagtaccctcccgctcaccagcggtagcaagggcctgcacctctacaccccg
ctcgacgagccggtgagcagcaagggcgccacggtgttggccaaacgggtcgcgcagcaa
ctggaaacggtgatgccggcgttggtcaccgcgaccatgaccaagagtctgcgggccggg
aaagtgttcctggactggagccaaaacagcggttcgaagaccaccatcgcgccgtattcg
ctgcgtgggcgcgaacaaccgacagtcgccgcaccacgcagttgggaggagctcgacgac
ccggggctgcgccagctgacctacgacgaggtgcttgcccgcctcacccgcgatggcgat
ctgattgcggcgctggacgcggacctccccggcgacgaccggctgctcaaatatcgcagc
atgcgcaacgcgtcgaaaacgccggagccggtgccccgagccagacccgttgtcgggcag
ggtaataccttcgtgatccaagagcatcacgcgcgccgtctgcattacgacttcaggctg
gagcgtgatggggtactggtgtcatgggcggtgccgaaaaacctgccggaaaccacgtcg
gtgaaccacctggccgtgcacaccgaagatcatccgctggaatacgcgacgttcgagggc
aacatcccgaaaggggagtacggcgccggcaaggtgatcatctgggattccggcacctat
gacaccgagaagttccgcgacgactcgagaaacggtgcggaaaagggggaggtgattgtc
aacctgcacggcagtcgaatctcggtgcggtacgcgctgattcagaccaacggggaccaa
tggctggcgcatcgcatgaaggaccagacggccttcgatttcgacaccctcgcgcccatg
ctcacctcccacggttcggtggcaggtctcgagtcgggtcagtgggcgttcgaaggcaag
tgggacggctaccggctgctggtcgaagccgaccatggcgcgctgcgactgcgctcccgc
agcggacgtgacgtcaccgcggaatacccccaattacgttcattggccgccgatctcgct
gatcaccacgtggtgctcgacggtgaattggtggccctcgactcctccggagtgcccagc
ttcaacgagatgcagaaccgggtgcgcgccacccgcatcgagttctgggcgttcgacttg
ctctttctggacggtcgctcgctactgcgggccagataccgcgaccggcgcaagctactg
gaaaccctgggcagtgcgggcaatctgatcgttccggagttgttgcccggtgacggcgcc
gaggcgctggcctactcgcacaagcgcggttgggagggagtcattgccaagcgccgcgac
tccggctatcaacccgggcggcgctcgtcggcgtggatcaaggacaaacactggaacacc
caggaagtcgtcatcggcggttggcgagttggggagggtgggcgcagcagcgggattgga
tcgttgctcatgggcattcccggcccgagcggtttgcacttcgccggccgtgttggaacc
ggcttcaccgaacgtgacctggccaacctcaagaagacgctggtgccgctgcataccgac
gaatccccattcgacgctgcgcttccggcgcgcgaggccaagggtgttacgttcgtcgcg
ccgacgctggtcggggaggtacgctatagcgagtggacccccgatgaccgattgcggcaa
tccagctggcgtgggttgcgcccggacaaaaacccgagtgaggtggtgcgcgaatga

DBGET integrated database retrieval system