KEGG   Mesorhizobium loti NZP2037: A9174_03965Help
Entry
A9174_03965       CDS       T04711                                 

Definition
(GenBank) DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
mln  Mesorhizobium loti NZP2037
Pathway
mln03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:mln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    A9174_03965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mln03400]
    A9174_03965
Enzymes [BR:mln01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     A9174_03965
DNA repair and recombination proteins [BR:mln03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     A9174_03965
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S RNA_ligase mRNA_cap_enzyme
Motif
Other DBs
NCBI-ProteinID: ANN56006
LinkDB All DBs
Position
845247..847736
Genome map
AA seq 829 aa AA seqDB search
MAGLEQYHAKRDFKKTSEPAGKVARTGKNEAGGIFVIHKHAATRLHYDLRLEHGGVLWSW
AVTRGPSLDPHEKRLAVHVEDHPIDYAPFEGTIPKGEYGGGSVIVWDEGTWVPETDPAKA
MKKGHISFELNGHKLHGLWHLVRLKPRAGEKRDNWLLIKSDDAAARPGEDILKERPESVK
SGLTIEEVGEGKAAKGKKPEVWHSNKPAAGTAKAASRKLDFIEPQLATLERNAPPGKDWL
HEVKFDGYRMQAQIAGTEVRLLTRTGLDWTDKFGSEIIAELAALKCSDAILDGEIVVLAD
NGVSSFALLQQDLSAKRKNRFLYYVFDLMRLDGKDLRAEPLVERKQALQELVGKQSENAA
VRFSDHFFEPGKIMLEHACRMGLEGVVSKRADAPYRSGRGPTWVKSKCTARQEFVIGGYL
PSDKTGRGLRSLLVGYYEGGKLQYAGRVGTGFSAKGAIALKNKLDALKAKASPFDKAVPK
GKGLVWVKPELVGEVEFRSWTSDRIIRHASFQGLREDKPAEDVVQEKPKAATGKGKPASS
GGGTMTTSVKLSHPDKLLWPDEKISKQGLLDHYAEVWPRMEQFVVNRPLSLVRAPDGIGG
PRFFQKHASAGMSDRIARMKDPTDGEEILFVRDFDGVAALVQYGVVEIHIWGCTIDKLEQ
PDQIIFDLDPDEGVDVKAVREAALDIRGKLDELSLPNFVKTSGGKGYHVLVPLKPSADWE
AVKTFAHDFAKALEQGAPDRYTATLSKKARTGKIFVDYLRNGRGSTTVAPYSSRAKKGAT
VSMPVTWAEIEAGLAPNAFPIGDKTTLKQLAEADPWVDFFKQGKVLKRG
NT seq 2490 nt NT seq  +upstreamnt  +downstreamnt
atggccggcctcgaacagtatcatgccaagcgcgatttcaagaagacatcggagccggcg
ggcaaggtcgcacgcaccgggaaaaacgaagccgggggcatcttcgtcatccacaagcac
gcggcgaccaggctgcactacgaccttcggctcgagcatggcggcgtgctgtggagctgg
gcggtgacgcgggggcccagcctcgatccgcacgagaagcggctggccgtccatgtcgag
gaccacccgatcgactatgcgccgttcgaaggcacgatcccgaagggcgagtatggcggc
ggctcggtcatcgtctgggacgaggggacatgggtgcctgagaccgacccggccaaggcg
atgaagaagggccacatcagtttcgagctcaacggccacaaattgcatgggctgtggcat
ctggtgcggctgaagccgcgggcgggcgaaaagcgcgacaactggctcttgatcaagtcc
gacgatgccgcggcgcgcccgggcgaggacattttgaaggagaggccggaatcggtgaag
tcgggcctgacgatcgaagaggtcggcgagggcaaggcggccaagggtaagaagccagaa
gtctggcactccaacaagccggccgccggcacggcgaaggccgcaagccgcaaactcgat
ttcatcgagccgcaactggcgacgctggagcggaacgcaccgccgggcaaggactggctg
catgaagtcaaattcgacggctatcgcatgcaggcgcagatcgccggcacggaagtgcgg
ctcttgacccgcaccggcctcgactggaccgacaagtttgggagcgagatcatcgcggaa
ctggccgcgctgaaatgcagcgacgccatcctcgacggcgagatcgtcgtgctggccgac
aacggcgtctcgtccttcgcgctgctgcagcaggatctgtcggcgaagcggaagaaccgc
ttcctctattacgtgttcgacctgatgcgtctcgacggcaaggatttgcgcgccgagccg
ctggtcgagcgcaagcaggccttgcaggaactggtcggcaagcagtcggaaaatgcggcg
gtgcgtttctccgaccatttttttgaacctggcaagatcatgctggagcatgcctgccgc
atggggctggaaggcgtcgtctcaaaacgcgccgatgcgccctatcgcagcgggcgcggc
ccgacctgggtgaagtcgaaatgcacggcacggcaggaattcgtcatcggcggctatctg
ccgtcggacaagaccgggcgcgggctgcgctcgctgctggtcggctattacgagggcggc
aaactgcagtatgccggtcgtgtgggcaccggcttctcggccaagggcgctatcgcgctg
aagaacaagctcgatgcgctgaaggcgaaggcttcgcccttcgacaaggccgtgccgaaa
ggcaaggggctggtctgggtcaagccggaattggtcggcgaagtggagtttcgcagctgg
acgtcggaccgtataatacgtcatgcctcgttccaggggctgcgcgaggacaagccggcg
gaggacgttgtgcaggaaaagcccaaggcagcgacaggcaagggcaagccggcctcgagc
ggcggcgggacgatgacgaccagcgtaaaactctcgcatcccgacaagctgctatggccc
gacgagaagatctccaagcagggcctgctcgaccattacgccgaggtttggccgcgcatg
gagcagttcgtcgtcaaccggccgctcagcctggtgcgggcgccggacggcatcggcggc
ccgcgcttcttccagaaacatgcctcggccggcatgagcgacagaatagcccggatgaaa
gacccgacggatggcgaggaaatcctgttcgtgcgagatttcgacggggtggcggcgctc
gtccaatacggcgtggtcgagatccacatctggggctgcacgatcgacaagcttgaacag
ccggaccagatcatcttcgatctcgaccccgatgaaggtgtcgacgtcaaagcggtgcgc
gaggcggcgctcgatatccggggcaagctcgacgagttgtcgctgccgaacttcgtcaag
acatcgggcggcaaaggctatcatgtgctggtgccgctgaagccatcggcggactgggag
gcggtgaagaccttcgcccatgatttcgccaaggcgctcgaacagggtgcccccgaccgc
tacacggccacactctcgaagaaggcgcgcaccgggaaaatcttcgtcgactatctgcgc
aatggcaggggctcgacgacggtcgcgccgtattcctcgcgcgccaagaagggcgccacc
gtatcgatgccggtgacctgggccgagatcgaggccggcctggcgccgaacgctttcccc
ataggcgacaagacgacgctgaagcagttggcggaagccgatccttgggtggatttcttc
aagcagggcaaggtgttgaagcgggggtag

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