Mesorhizobium loti NZP2037: A9174_25570
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Entry
A9174_25570 CDS
T04711
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
mln
Mesorhizobium loti NZP2037
Brite
KEGG Orthology (KO) [BR:
mln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mln03016
]
A9174_25570
Enzymes [BR:
mln01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A9174_25570
Transfer RNA biogenesis [BR:
mln03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A9174_25570
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ANN59755
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All DBs
Position
5271413..5272564
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AA seq
383 aa
AA seq
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MHVITTQKELETVLAAFEKSDFVTVDTEFIRETTFWPILCLIQMAAPGVTALIDPLSPDI
NLAPFFRLMANEAVVKVFHAARQDIEIIVHLGDLVPHPVFDTQVAAMVCGFGDSVSYDQL
VQRITGARLDKSSRFTDWRHRPLSDKQLDYALADVTHLIEVYQHLSAELARENRAHWLNE
EMDVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERDVPRGRVLKDD
AIYEVAQQAPRDAAALAKLRTTPKGWERSSTATALLGAVNTALALPKEQMPKLPKNFQPP
EGSSAAAELLKVLLRIVAEKQGVASKVLASSDDIDRIAAEGEDADVPALQGWRRAVFGEA
ALKLVRGEIGIKFDKRKIAVFDL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtcatcaccacccagaaagaactcgagaccgttctcgccgctttcgaaaagtcg
gatttcgttaccgtcgacaccgagttcatccgcgaaacgaccttctggccgatcctgtgc
ctgatccagatggcggcgcctggcgtcactgcgctgatcgacccgctgtcgcccgacatc
aacctcgccccgttcttccggctgatggccaacgaggccgtggtcaaggtcttccacgcg
gcgcgccaggacatcgaaatcatcgtccatctcggcgatctcgtgccccacccggtgttc
gacacgcaggtcgcggccatggtctgcggcttcggcgacagcgtttcctacgaccagctc
gtgcagcgcatcaccggcgcgcggctcgacaagtcatcgcgcttcacagactggcgccac
cggccgctgtccgacaagcagctcgactacgcgctcgccgacgtcacccatctgatcgag
gtctatcagcatttgagcgccgaactggcgcgggagaaccgcgcccactggctgaacgaa
gagatggacgtcctgacctcgcgcgagacctacgatccgcatccggaggacgcctggaag
cggctgaaaatgcggctgcgcaagccgcaggaacttgcgatcgtgcaggccgtggcggca
tggcgcgagcgcgaggcgcgcgagcgcgacgtgccgcgcggccgcgtgctcaaggacgac
gcgatctacgaggtggcgcagcaggcgccgcgcgacgcggcggccctcgccaagctgcgc
acaacgcccaagggctgggagcgctcctcgacggcgacggccctgcttggagcggtcaac
accgcgctggccttgcccaaggagcagatgccgaaactgccgaagaatttccagccgccg
gaaggctcgagcgccgcggccgaactgttgaaagtgctgctcaggatcgtcgccgagaag
cagggcgtggcctcgaaggtgctggcctccagcgacgacatcgaccgcatcgccgccgag
ggcgaggacgccgacgtgccggcgctgcagggctggcggcgcgccgtcttcggcgaagcg
gcgctgaagctggtgcgcggcgagatcggcataaagttcgacaagcgtaaaatagcggtg
ttcgatctctag
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