Mesorhizobium japonicum MAFF 303099: mll4824
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Entry
mll4824 CDS
T00043
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlo03021
]
mll4824
Transcription machinery [BR:
mlo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
mll4824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_Tnp_1
HTH_28
DUF1804
DUF4635
CENP-B_N
Phage_CI_repr
bpX5
DUF3834
Motif
Other DBs
NCBI-ProteinID:
BAB51393
RhizoBase:
mll4824
UniProt:
Q98D78
LinkDB
All DBs
Position
complement(3836084..3836623)
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AA seq
179 aa
AA seq
DB search
MTPQDITKLIVRTSMKDRAAFDLLYRQTSAKLFGVCLRVLNDRGDAEEALQEVFVKIWTK
ADRFAVSDLSPISWLVAIARNHAIDRVRARRKSAADIDAALEVADPAPGPEAMVVAGDES
QRIHHCLEELEKDRAAAVRGAYLKGESYAELAERHGVPLNTMRTWLRRSLMKLRECLER
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgcaggacatcaccaagctgatcgtccggacttcgatgaaggatcgggcagcg
ttcgatctgctctaccggcagaccagcgcgaaacttttcggcgtgtgccttcgtgtattg
aacgaccggggagatgctgaagaagcgctgcaggaagtcttcgtcaagatatggacaaag
gcggaccgttttgccgtctccgatctgagcccgatctcctggctggtggcaatcgcccgc
aaccacgcgatcgatcgcgtcagggcacggcgtaagtctgccgccgatatcgatgccgcg
ctcgaggtggccgatccggcaccgggacctgaagcgatggtggtggcgggcgacgaatcc
caacgcatccatcattgtctggaggagctggagaaggaccgggcggcggccgttcggggc
gcttatctcaagggcgaaagctatgccgaactggcggaacgccacggcgtgccgctgaac
acgatgcgtacctggctgcgccgcagcctgatgaaactgagagaatgtctggaaagatga
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