Mesorhizobium japonicum MAFF 303099: mll6896
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Entry
mll6896 CDS
T00043
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
mlo
Mesorhizobium japonicum MAFF 303099
Pathway
mlo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mlo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
mll6896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlo03400
]
mll6896
Enzymes [BR:
mlo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
mll6896
DNA repair and recombination proteins [BR:
mlo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
mll6896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Gly_transporter
Motif
Other DBs
NCBI-ProteinID:
BAB53097
RhizoBase:
mll6896
UniProt:
Q987V3
LinkDB
All DBs
Position
complement(5673842..5675407)
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AA seq
521 aa
AA seq
DB search
MSEAASESRTNATEYTVSEISGALKRTVEDVFGNVRVRGEISGYRGPHSSGHAYFALKDD
RARLDAVVWKGTMSRLKFRPEEGMEVIATGKLTTYPGKSNYQIVIDNLEPAGAGALMALL
EERKRRLQAEGLFDAGRKRRLPFMPRTIGVVTSPTGSVIRDIIHRIKDRFPLHVLVWPVR
VQGDTASAEVTNAVTGFNALAWDGSIQRPDLLIVARGGGSLEDLWGFNDEALARAVAASG
IPVISAVGHETDWTLIDLVADVRAPTPTGAAEIAVPVKADLEATLASLGARLKAAVLRNF
ERKRQAARAAARALPSPDQLLALPRRRLDEATSRLGRGLSVSVDRKRARLQGQRLTPATL
SRRINEARTLTGRDLARAQAAFFAIVRERRARFARTATRLSPAPIARRQKLQADTLAALA
RRQDRVISLRLERLRGQLSQAERLLTTLSHKAVLARGFALVKNADGAVIKQAADVVSGMA
LTLEFADGTADAVATSGAARPKPAAKPSTKAKEPGNQGSLF
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcagcatccgaatcacgcaccaacgccaccgaatacacggtgagcgagatt
tccggcgcgctgaagcgcacggtcgaggacgtcttcggcaatgtgcgggtgcgcggcgaa
atctcgggctatcgcggcccgcattcctccggccatgcctatttcgcactgaaggacgac
cgcgcacggctcgatgccgtggtgtggaagggcacgatgagccggctgaaattccgcccc
gaggaagggatggaggtgatcgccaccggcaagctcaccacctaccccggcaagtccaac
taccagatcgtcatcgacaatctggagcctgccggcgcaggcgcgctgatggcgctgctg
gaagagcgcaagcgccggctgcaggcggaggggcttttcgatgccggccgcaaacgccgg
ttgccgttcatgccgcgcacaatcggcgtcgtcacctcgccgaccgggtcggtcatccgc
gacatcatccaccgcatcaaggaccgctttccgctgcatgtgctggtctggccggtgcgc
gtgcagggcgatactgcgagtgcggaagtgaccaatgccgtcaccggcttcaacgcgctg
gcctgggatggctccatccagcgccccgatctcctgatcgtggcgcgcggcggcggcagc
ctggaggatctgtggggcttcaacgacgaggcgctggcccgcgccgttgcggcctccggc
attccggtgatttccgctgtcggccacgagaccgactggacgctgatcgacctcgtcgcg
gatgtgcgggcgccgaccccgacgggcgccgccgaaatcgcggtgccggtgaaggctgac
ctcgaagcgacgctggccagccttggcgcgcggctcaaggcggcggtgttgcgcaatttc
gaacgcaagcggcaggccgcccgcgcggcggcgcgcgccctgccctcacccgatcaattg
ctggcgctgccgcgccgacgcctcgacgaggcgacatccaggctcggtcgtggcctgtcc
gtcagcgtcgatcgcaagcgggcgcgtctccagggccagaggctgacgccggctacgctg
tcgcgacgcatcaacgaggcgcgcacgctgaccgggcgtgacctcgcccgcgcgcaggcg
gcgttctttgccattgtgcgcgaacggcgcgcacgcttcgcgcgtaccgcgacgcggctg
tcgccggcgccgatcgcacgccggcagaaactgcaggccgacacgctggcggcgctcgcc
aggcggcaagatcgggtcatctcgctgcggctcgaacgcctgcgcggccagttgagccag
gccgagcgcctgctgaccacgctgtcgcacaaggccgtgctcgcgcgcggcttcgcgctg
gtgaagaatgccgacggcgccgtcatcaagcaggcggccgacgtggtatcggggatggcg
cttacgctggagttcgccgacggcacggcggatgcggtggcgaccagcggtgcggcgcgg
ccaaagccggcagccaagccatcaacaaaggccaaagaacccggcaatcagggatcgctg
ttctga
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